DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14100 and trmH

DIOPT Version :10

Sequence 1:NP_649130.2 Gene:CG14100 / 40132 FlyBaseID:FBgn0036889 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_418108.1 Gene:trmH / 948161 ECOCYCID:EG10967 Length:229 Species:Escherichia coli


Alignment Length:171 Identity:40/171 - (23%)
Similarity:73/171 - (42%) Gaps:27/171 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 QPFPITVVCDNIREPNNLGSIIRTCAALPCSQVVVTHGCCDPWESKALR----GGCGGQFRVPIR 292
            || .:||..:.:.:|:|:.:||||..|:...:|   |..   |....:|    ...|....|.::
E. coli    17 QP-DLTVCMEQVHKPHNVSAIIRTADAVGVHEV---HAV---WPGSRMRTMASAAAGSNSWVQVK 74

  Fly   293 DDVTWDELALTIPPEAADDCHVFIAETNQRKRENNQTIDYADIKGLGAHNLLIIGGESHGVSEEA 357
            ...|..:....:..:........:::.....||    |||.      ....:::|.|..|:::||
E. coli    75 THRTIGDAVAHLKGQGMQILATHLSDNAVDFRE----IDYT------RPTCILMGQEKTGITQEA 129

  Fly   358 YRFLNLVGGKGKCIYIPLAAGIDSLNVASALTLLLFELRRK 398
            ....:      :.|.||:...:.||||:.|..|:|:|.:|:
E. coli   130 LALAD------QDIIIPMIGMVQSLNVSVASALILYEAQRQ 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14100NP_649130.2 SpoU_sub_bind 141..215 CDD:429793
SpoU-like_RNMTL1 236..395 CDD:349979 36/162 (22%)
trmHNP_418108.1 PRK11081 1..228 CDD:236837 40/171 (23%)
Blue background indicates that the domain is not in the aligned region.

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