DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14100 and MRM1

DIOPT Version :9

Sequence 1:NP_649130.2 Gene:CG14100 / 40132 FlyBaseID:FBgn0036889 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_014844.3 Gene:MRM1 / 854376 SGDID:S000005727 Length:412 Species:Saccharomyces cerevisiae


Alignment Length:201 Identity:48/201 - (23%)
Similarity:82/201 - (40%) Gaps:39/201 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 SDKGLEKNLAEQQRLGSQPFPITVVCDNIREPNNLGSIIRTCAALPCSQVVVTHGCCDPWESKAL 279
            :::.:...|....:..::.||:.:..|.|.:|:|:|:|||:...|....:|::...|.|......
Yeast   221 NNENIPHELPYGTKTDAKKFPLGLYLDEITDPHNIGAIIRSAYFLGVDFIVMSRRNCSPLTPVVS 285

  Fly   280 RGGCGGQFRVPI-------------RDDVTWDELALTIPPEAADDCHVFIAETNQRKRENNQTID 331
            :...|....:||             ::...|..:.          .|  :|.....|....:||.
Yeast   286 KTSSGALELLPIFYVDKPLEFFTKSQEMGGWTFIT----------SH--LANATSEKYTVGKTIS 338

  Fly   332 YADIKGLGAHNL---LIIGGESHGVSEEAYR----FLNL-VGG--KGKCIYIPLAAGIDSLNVAS 386
            ..|:.|| .:.|   |::|.||.||......    |:.: .||  ||.....|:   :|||||:.
Yeast   339 MHDLNGL-CNELPVVLVVGNESQGVRTNLKMRSDFFVEIPFGGIEKGNRAPEPI---VDSLNVSV 399

  Fly   387 ALTLLL 392
            |..||:
Yeast   400 ATALLI 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14100NP_649130.2 SpoU 131..399 CDD:223640 48/201 (24%)
SpoU_sub_bind 141..214 CDD:285300
SpoU_methylase 235..393 CDD:278985 46/181 (25%)
MRM1NP_014844.3 rRNA_methyl_3 123..412 CDD:129290 48/201 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.