DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14100 and AT4G38020

DIOPT Version :9

Sequence 1:NP_649130.2 Gene:CG14100 / 40132 FlyBaseID:FBgn0036889 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_195515.2 Gene:AT4G38020 / 829958 AraportID:AT4G38020 Length:352 Species:Arabidopsis thaliana


Alignment Length:402 Identity:95/402 - (23%)
Similarity:165/402 - (41%) Gaps:107/402 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LRLSSSSGPRGEIQDALDIEANLFGNSDLRHEPMNTREALRKNRFAGRKPKVPFASVASRNLSAP 87
            ||.||:..||.:||.....:.:::|:.                                      
plant    27 LRASSAQLPRTQIQINPSDDLSIYGSD-------------------------------------- 53

  Fly    88 SNPAPRVAPTPAPVIKDNELNLEFVRLTLQDPLTSTLLTTVRSRKRRDKNRQIIVEGRRLIQEAL 152
            .:||.||: .|:.|   |.:.      :..:|.....|...:|...|..:..::|.|...|:|. 
plant    54 KSPANRVS-LPSHV---NSIT------STTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIREV- 107

  Fly   153 QC-------GLKMEVLLFSQKDQLALVKEEVGVAQ-VET-GTKIYKVPQHDLKTWSSLVTPPGLM 208
             |       |:..|:       :..|:.||..:.| :|: ..:|.:|....:|..|.:.:...:.
plant   108 -CMFQTNKQGMTTEI-------ECLLLHEEAKIPQGLESLSIRIVRVSSLVMKKLSGVQSTESVE 164

  Fly   209 AI---------FDRPSDKGLEKNLAEQQRLGSQPFPI---TVVCDNIREPNNLGSIIRTCAALPC 261
            ||         .|...||.:..:.       ::.||.   .:|.|:|::|.|||:::|:..|...
plant   165 AIALMRIPSSFTDLKDDKDIITDC-------NKWFPSAHRVLVLDSIQDPGNLGTLVRSAMAFNW 222

  Fly   262 SQVVVTHGCCDPWESKALRGGCGGQFRVPIRDDVTWDELALTIPPEAADDCHVFI-----AETNQ 321
            ....:..|||||:..||||...|..|::||... .|:.|.|     ..::..:.:     |.|.|
plant   223 DGAFLLPGCCDPYNDKALRASRGASFQLPIVSG-NWNHLKL-----LENEFQMKLLAGHPATTTQ 281

  Fly   322 R-KRENNQTIDYADIKGLGAHNL-LIIGGESHGVSEEAYRFLNLVGGKGKCIYIPLAAGIDSLNV 384
            : |..:..::::|  :.|....| ||:|.|.:|:||:|.:...||.       ||:|...:||||
plant   282 KLKPVSKLSVEFA--QSLAEKPLCLILGSEGNGLSEQARKVCVLVS-------IPMAGDFESLNV 337

  Fly   385 ASALTLLLFELR 396
            :.|..:.|:.|:
plant   338 SVAGGIFLYMLQ 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14100NP_649130.2 SpoU 131..399 CDD:223640 76/294 (26%)
SpoU_sub_bind 141..214 CDD:285300 19/90 (21%)
SpoU_methylase 235..393 CDD:278985 51/167 (31%)
AT4G38020NP_195515.2 SpoU-like_rRNA-MTase 197..348 CDD:349968 51/165 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I3455
eggNOG 1 0.900 - - E1_COG0566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1183644at2759
OrthoFinder 1 1.000 - - FOG0006042
OrthoInspector 1 1.000 - - oto4178
orthoMCL 1 0.900 - - OOG6_102998
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4335
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.720

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