DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14100 and AT2G19870

DIOPT Version :10

Sequence 1:NP_649130.2 Gene:CG14100 / 40132 FlyBaseID:FBgn0036889 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_849992.1 Gene:AT2G19870 / 816506 AraportID:AT2G19870 Length:589 Species:Arabidopsis thaliana


Alignment Length:471 Identity:95/471 - (20%)
Similarity:151/471 - (32%) Gaps:191/471 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VNNLNV----LRLSSSSGPRGEIQDALDIEANLF------GNSDLRHEPMNTREALRKNRF---- 67
            |||.:.    .|..:|...||:.:...:.|....      |:..:..||.|||.:..||||    
plant   211 VNNRSSWDDRTRNQNSFSARGDDRITEEAEEETMNHAPEDGDGIVEEEPDNTRWSEIKNRFNRYD 275

  Fly    68 ---AGRKPKVPFASVASRNLS------------APSNPAPR--------VAPTPAPVIKDNELNL 109
               .||.      ..|.||.:            |..:..||        |:|..|.:.....   
plant   276 VRDQGRD------DAAYRNWNRQESWGRKTWQEATESSVPRLEGEVVYGVSPVLAALSVGRR--- 331

  Fly   110 EFVRLTLQDPLTSTLLTTVRSRKRRDKNRQIIVEGRRLIQEALQCGLKMEVLLFSQKDQLALVKE 174
            ||..|.:|:.|.    .:..:||::||.                 |.: .||..|:|        
plant   332 EFYALYVQEGLD----LSSNNRKKKDKK-----------------GFE-RVLKISEK-------- 366

  Fly   175 EVGVAQVETGTKIYKVPQHDLKTWSSLVTPPGLMAIFDRPSD--------------KGLEKNLAE 225
                    .|..|.:..:|||.           |...:||..              |.|:...:|
plant   367 --------LGLNIKETSKHDLN-----------MVADNRPHQGLVLDASPLELVKVKELDPISSE 412

  Fly   226 QQRLGSQPFPITVVCDNIREPNNLGSIIRT-----------CA--ALPCSQVVVTHGCCDPWESK 277
            :::     :.:.|..|.:.:|.|||:|||:           ||  :.|.|.||          ||
plant   413 EEK-----YSLWVALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVV----------SK 462

  Fly   278 ALRGG--------CGGQFR-VPIRDDVTWDELALTIPPEAADDCHVFIAETNQRKRENNQTIDYA 333
            |..|.        |....: :....:..|..:..::.|:|.               ..|:.:.  
plant   463 ASAGSLEVMELRYCKNMMQFLEASAENGWRVVGGSVSPKAV---------------ALNEVLP-- 510

  Fly   334 DIKGLGAHNLLIIGGESHG----VSEEAYRFLNLVG---------------GKGKCIYIPLAAGI 379
                 |:..:|::|.|..|    |.......:.:.|               |:|...::    .:
plant   511 -----GSPTILVLGNEGTGLRPLVERSCTDLVRISGNMPNEVAVTESDDAEGEGFRSFL----AV 566

  Fly   380 DSLNVASALTLLLFEL 395
            :||||:.|..|.|..|
plant   567 ESLNVSVAAGLFLHHL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14100NP_649130.2 SpoU_sub_bind 141..215 CDD:429793 12/73 (16%)
SpoU-like_RNMTL1 236..395 CDD:349979 40/199 (20%)
AT2G19870NP_849992.1 SpoU_sub_bind 315..399 CDD:429793 25/135 (19%)
SpoU-like_MRM1 418..582 CDD:349978 40/199 (20%)

Return to query results.
Submit another query.