DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14100 and Mrm3

DIOPT Version :9

Sequence 1:NP_649130.2 Gene:CG14100 / 40132 FlyBaseID:FBgn0036889 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001101752.1 Gene:Mrm3 / 360569 RGDID:1309077 Length:418 Species:Rattus norvegicus


Alignment Length:411 Identity:131/411 - (31%)
Similarity:209/411 - (50%) Gaps:56/411 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SSGPRGEIQDALDIEANLFGNSDLRHEPMN----TREALRKNRFAGRKPK--VPFASVASRNLSA 86
            |.||...:....|::|..:..: ||..|:.    :.:...:.|...::|:  ||.||...:....
  Rat    11 SLGPLLRVVQTRDLDARRWVRA-LRRSPVRVLFPSGQVEERKRAPDKQPRKAVPEASSQGQQQKQ 74

  Fly    87 PSNPAPRVAPTPAPVIKDNELNLEFVRLTLQDPLTSTLLTTVRSRKRRDKNRQIIVEGRRLIQEA 151
            |...:|...|...     .|..|.:.:....|...|:::|.|:||..|:|..:|::||||||.:|
  Rat    75 PLETSPSQTPHTW-----EEAGLRYDKACPGDRRLSSVMTIVKSRPFREKQGKILLEGRRLIADA 134

  Fly   152 LQCGLKMEVLLFSQKDQLALVKEEVGVAQVETGTKIYKVPQHDLKTWSSLVTPPGLMAIFDRPSD 216
            |:.|...::..||:.:.:    :|:.|.::: |..:.||...|:|.||.||||.|:|.||.:|..
  Rat   135 LKAGAVPKMFFFSRLEYI----KELPVDKLK-GVSLIKVKFEDIKDWSDLVTPQGIMGIFAKPDP 194

  Fly   217 KGLEKNLAEQQRLGSQPFPITVVCDNIREPNNLGSIIRTCAALPCSQVVVTHGCCDPWESKALRG 281
              ::....|.|...|  .|:.::|||:|:|.|||:|:|:.|...||:|::|.||.|.||.|.||.
  Rat   195 --VKMTYPETQLHHS--LPLLLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRA 255

  Fly   282 GCGGQFRVPIRDDVTWDELALTIPPE----AADDCHVFIA-----ETNQR---------KRENNQ 328
            |.|..|:|||.::|.|:.:...:||:    .||:|.::..     :|..|         |...|:
  Rat   256 GMGAHFQVPIVNNVEWETVPNHLPPDTRVYVADNCGLYAQVQMSNKTGDRDWACDRRFLKFHKNE 320

  Fly   329 T---------------IDYADIKGLGAHNLLIIGGESHGVSEEAYRFLNLVGGKGKCIYIPLAAG 378
            .               :...|:....|...|:||||:||||.|:.:.....|||.  :.||:..|
  Rat   321 VDLDTKARKDWLPKLEVQSYDLDWTEAPAALVIGGETHGVSLESLQLAESTGGKR--LLIPVVPG 383

  Fly   379 IDSLNVASALTLLLFELRRKL 399
            :||||.|.|.::||||.:|:|
  Rat   384 VDSLNSAMAASILLFEGKRQL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14100NP_649130.2 SpoU 131..399 CDD:223640 106/300 (35%)
SpoU_sub_bind 141..214 CDD:285300 28/72 (39%)
SpoU_methylase 235..393 CDD:278985 66/190 (35%)
Mrm3NP_001101752.1 SpoU_sub_bind 125..191 CDD:214943 28/70 (40%)
SpoU-like_RNMTL1 210..400 CDD:349979 67/191 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6115
eggNOG 1 0.900 - - E1_COG0566
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10033
Inparanoid 1 1.050 184 1.000 Inparanoid score I3856
OMA 1 1.010 - - QHG50134
OrthoDB 1 1.010 - - D1183644at2759
OrthoFinder 1 1.000 - - FOG0006042
OrthoInspector 1 1.000 - - oto96163
orthoMCL 1 0.900 - - OOG6_102998
Panther 1 1.100 - - LDO PTHR43191
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4335
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.880

Return to query results.
Submit another query.