DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9330 and ABCF5

DIOPT Version :9

Sequence 1:NP_649129.1 Gene:CG9330 / 40131 FlyBaseID:FBgn0036888 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_201289.1 Gene:ABCF5 / 836607 AraportID:AT5G64840 Length:692 Species:Arabidopsis thaliana


Alignment Length:665 Identity:197/665 - (29%)
Similarity:320/665 - (48%) Gaps:86/665 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NIMKNNEVNVERK---VLNAPVNIEEMAKNMERLDKDMQSIWVANKDGANKVDSKKLGKAEAKLQ 130
            |.:|.:.::..|:   .:.|.|:...:..::::...:::|::                       
plant    28 NFIKISSISNPRRDISTIRAQVSTISLETSVKQRQDEIESLF----------------------- 69

  Fly   131 QKQEKRQEVNKHGMIPVAVKLQTATASQVTNKKNTKLDQKGLNR-SMDIKIENFDLAFGEKVLLQ 194
            .||..:|:.::                    |:|.|..:.|.:. |..:|:||...::....:|:
plant    70 SKQPSQQDSDR--------------------KRNGKSSKNGASGISSGVKLENIRKSYKGVTVLK 114

  Fly   195 NANLLLSYGRRYGLVGRNGLGKTTLLRMIAERQ-------LQIPSHISVLHVEQEV-VGDDTPAV 251
            :....:..|.:.||||.||.||||.||:|..::       ::...::.|..:.||. |.......
plant   115 DVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQEFEVSMSKTVR 179

  Fly   252 ESVLECDTERTRLLTREKEILAALNNGVQDATLSNELSETYASLQN----IEADKAVARASVILK 312
            |..:....|...:..:.:::..|:...|.|..|...|.:.:..||.    :..|...|:.|.::.
plant   180 EEFMTAFKEEMEITEKLEKVQKAIEGSVDDLDLMGRLLDEFDLLQRRAQAVNLDSVDAKISKLMP 244

  Fly   313 GLGF---DADMQLRPTKSFSGGWRMRLALARALFSKPDLLLLDEPTNMLDIKAIIWLENYLQTWA 374
            .|||   |||   |...||||||:||::|.:.|...|||||||||||.||:..|.|||.|||...
plant   245 ELGFAPEDAD---RLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLQKQD 306

  Fly   375 TTILVVSHDRNFLDTVPTDIIHLHSQELEAYKGNYEQFEKTKTEKLKSQRREYEAQMAHRAHVQD 439
            ..::::||||.|||.:.|.|:.........::|||.|:..:|.|.:::|...:|.|.......:|
plant   307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTFEGNYSQYVISKAEWIETQNAAWEKQQKDIDSTKD 371

  Fly   440 FIDRFRYNAN--RASSVQSKIKMLEKLPELKPVEK---ETVVTLKFPEVEPLNPPVLAISEVTFR 499
            .|.|....||  |||:.:.|   ||||.|.:.:||   ...:.::|||.......|:.:..:.|.
plant   372 LIARLGAGANSGRASTAEKK---LEKLQEQELIEKPFQRKQMKIRFPERGTSGRSVVNVKNIDFG 433

  Fly   500 YNPEDPLPIFKGVNLSATSDSRICIVGENGAGKSTLLKIIVGQLSTIHGNIVL--HRGLRIGYFA 562
            :  ||.: :||..|||.....:|.|:|.||.|||||||:|:|....:.|.::|  |..|. .||.
plant   434 F--EDKM-LFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVILGEHNVLP-NYFE 494

  Fly   563 QHHVDHLNMNVTCVGVLAELFPGRPDEEYRRQLGSFGISGPLALQSIASLSGGQKSRVALAKMCM 627
            |:..:.|:::.|.:..:.|.......::.:..||.......:..:.::.||||:|:|:|..|..:
plant   495 QNQAEVLDLDKTVLETVCEAAEDWRSDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559

  Fly   628 AEPNFLVLDEPTNHLDIETIDALGRAINAFKGGVILVSHDERLIKVVCKELWVCGNRTVRAIEGG 692
            .....||||||||||||.:.:.|..|||.::|.||.||||...||.:.       ||.:...:|.
plant   560 TPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFIKQIV-------NRVIEVEDGC 617

  Fly   693 LDEYKREVYKEIEAN 707
            |::|..:....:|.|
plant   618 LEDYAGDYNYYLEKN 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9330NP_649129.1 PLN03073 1..698 CDD:215558 195/654 (30%)
ABCF_EF-3 178..401 CDD:213188 80/237 (34%)
ABC_tran_Xtn 395..480 CDD:289608 25/89 (28%)
ABCF_EF-3 491..685 CDD:213188 68/195 (35%)
ABCF5NP_201289.1 Uup 99..631 CDD:223562 181/548 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D580544at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100624
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

Return to query results.
Submit another query.