DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9330 and ABCF1

DIOPT Version :9

Sequence 1:	NP_649129.1	Gene:	CG9330 / 40131	FlyBaseID:	FBgn0036888	Length:	708	Species:	Drosophila melanogaster
Sequence 2:	NP_200887.1	Gene:	ABCF1 / 836200	AraportID:	AT5G60790	Length:	595	Species:	Arabidopsis thaliana

Alignment Length:	590	Identity:	232/590 - (39%)
Similarity:	355/590 - (60%)	Gaps:	24/590 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly   127 AKLQQKQEKRQEVNKHGMIPVAVKLQTATASQVTNKKNTKLDQKGLN------------RSMDIK 179
            :|.:..|:|.....|.|....|.....||:|...:..::.:|...::            :|.||:
plant     6 SKKKAAQKKAAAAAKRGGKAAAPSKSAATSSNGVDSLSSGVDALQISDRTCTGVLCSHPQSRDIR 70

  Fly   180 IENFDLAFGEKVLLQNANLLLSYGRRYGLVGRNGLGKTTLLRMIAERQLQIPSHISVLHVEQEVV 244
            ||:..:.|....|:.::.|.|:|||||||:|.||.||:|||..|..|::.||..:.:.|:..|:.
plant    71 IESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIPIPDQMDIYHLSHEIE 135

  Fly   245 GDDTPAVESVLECDTERTRLLTREKEILAALNNGVQDATLSNELSETYASLQNIEADKAVARASV 309
            ..|..::|:|:.||.||.| |.:|.|||..     ||......|...|..|..::|:.|..||:.
plant   136 ATDMSSLEAVVSCDEERLR-LEKEVEILVQ-----QDDGGGERLQSIYERLDAMDAETAEKRAAE 194

  Fly   310 ILKGLGFDADMQLRPTKSFSGGWRMRLALARALFSKPDLLLLDEPTNMLDIKAIIWLENYLQTWA 374
            ||.|||||.:||.:.||.||||||||:|||||||..|.:||||||||.||::|.:|||..|:.:.
plant   195 ILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTNHLDLEACVWLEESLKNFD 259

  Fly   375 TTILVVSHDRNFLDTVPTDIIHLHSQELEAYKGNYEQFEKTKTEKLKSQRREYEAQMAHRAHVQD 439
            ..::||||.::||:.|.|:|||:.|::|:.|.||::|:.:|::|..::|.::|..:....:|:::
plant   260 RILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFDQYCQTRSELEENQMKQYRWEQEQISHMKE 324

  Fly   440 FIDRFRY-NANRASSVQSKIKMLEKLPE---LKPVEKETVVTLKFPEVEPLNPPVLAISEVTFRY 500
            :|.||.: :|..|...|||.|.|.|:..   .:.|.:::|:..:|.:|..|.||||...||:|.|
plant   325 YIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARDSVLVFRFADVGKLPPPVLQFVEVSFGY 389

  Fly   501 NPEDPLPIFKGVNLSATSDSRICIVGENGAGKSTLLKIIVGQLSTIHGNIVLHRGLRIGYFAQHH 565
            .|:  ..|:|.::.....|||:.:||.||||||||||::.|:|....|.:..|..|:|..:.||.
plant   390 TPD--YLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGELHPTEGMVRRHNHLKIAQYHQHL 452

  Fly   566 VDHLNMNVTCVGVLAELFPGRPDEEYRRQLGSFGISGPLALQSIASLSGGQKSRVALAKMCMAEP 630
            .:.|::.:..:..:...|||..:|:.|..:|.||::|...:..:.:||.||:|||..|.:...:|
plant   453 AEKLDLELPALLYMMREFPGTEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQP 517

  Fly   631 NFLVLDEPTNHLDIETIDALGRAINAFKGGVILVSHDERLIKVVCKELWVCGNRTVRAIEGGLDE 695
            |.|:||||||||||||||:|..|:|.:.||::|||||.|||..|..|:|||..:.:....|.:.:
plant   518 NMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCEKQCITKWNGDIMD 582

  Fly   696 YKREV 700
            :||.:
plant   583 FKRHL 587

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9330	NP_649129.1	PLN03073	1..698	CDD:215558	230/586 (39%)
		ABCF_EF-3	178..401	CDD:213188	104/222 (47%)
		ABC_tran_Xtn	395..480	CDD:289608	26/88 (30%)
		ABCF_EF-3	491..685	CDD:213188	84/193 (44%)
ABCF1	NP_200887.1	Uup	66..584	CDD:223562	220/525 (42%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0488
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53504
OrthoDB	1	1.010	-	-		D580544at2759
OrthoFinder	1	1.000	-	-		FOG0000863
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.830