DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9330 and ABCF2

DIOPT Version :9

Sequence 1:	NP_649129.1	Gene:	CG9330 / 40131	FlyBaseID:	FBgn0036888	Length:	708	Species:	Drosophila melanogaster
Sequence 2:	NP_196555.2	Gene:	ABCF2 / 830854	AraportID:	AT5G09930	Length:	678	Species:	Arabidopsis thaliana

Alignment Length:	574	Identity:	185/574 - (32%)
Similarity:	284/574 - (49%)	Gaps:	48/574 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   166 KLDQKGLNR-----SMDIKIENFDLAFGEKVLLQNANLLLSYGRRYGLVGRNGLGKTTLLRMIAE 225
            ||..|..|.     |..:::||...::....:|::....:..|.:.||:|.||.||||.||:|..
plant    67 KLISKQSNNGASSISSGVRLENISKSYEGITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITG 131

  Fly   226 RQ-------LQIPSHISVLHVEQEVVGDDTPAVESVLECDTERTRLLTREKEIL-AALNNGVQDA 282
            ::       :....::.|..:.||........|:....|..:....:.|:.|.| .|:...|.|.
plant   132 QEEPDSGNVIWAKPNLKVAFLSQEFEVSMGKTVKEEFMCTFKEEMEIARKLENLQKAIEEAVDDL 196

  Fly   283 TLSNELSETYASL----QNIEADKAVARASVILKGLGF---DADMQLRPTKSFSGGWRMRLALAR 340
            .|..:|.:.:..|    |.::.|...|:.|.::..|||   |||   |...|||.||:||::|.:
plant   197 ELMGKLLDEFDLLQRRAQEVDLDSIHAKISKLMSELGFVSEDAD---RLVASFSSGWQMRMSLGK 258

  Fly   341 ALFSKPDLLLLDEPTNMLDIKAIIWLENYLQTWATTILVVSHDRNFLDTVPTDIIHLHSQELEAY 405
            .|...|||||||||||.||:..|.|||.||......::::||||.|||.:.|.|:.........:
plant   259 ILLQNPDLLLLDEPTNHLDLDTIEWLEGYLIKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTF 323

  Fly   406 KGNYEQFEKTKTEKLKSQRREYEAQMAHRAHVQDFIDRFRYNAN--RASSVQSKIKMLEKLPELK 468
            .|||.|:..:|.|.:::|...:|.|.......:|.|.|....||  ||||.:.|   ||||.|.:
plant   324 DGNYSQYVISKAELVEAQYAAWEKQQKEIEATKDLISRLSAGANSGRASSAEKK---LEKLQEEE 385

  Fly   469 PVEK---ETVVTLKFPEVEPLNPPVLAISEVTFRYNPEDPLPIFKGVNLSATSDSRICIVGENGA 530
            .:||   ...:.::|||.......|:.:..:.|.:   |...:|...||:.....::.|:|.||.
plant   386 LIEKPFQRKQMKIRFPECGLSGRSVVTVKNLVFGF---DDKMLFNKANLAIERGEKVAIIGPNGC 447

  Fly   531 GKSTLLKIIVGQLSTIHGNIVL--HRGLRIGYFAQHHVDHLNMNVTCVGVLAELFPGRPDEEYRR 593
            |||||||:|:|....:.|.::|  |..|. .||.|:..:..:::.|.:..:.|.......::.:.
plant   448 GKSTLLKLIMGLEKPMRGEVILGEHNVLP-NYFEQNQAEAQDLDKTVIETVVEAAVDWRIDDIKA 511

  Fly   594 QLGSFGISGPLALQSIASLSGGQKSRVALAKMCMAEPNFLVLDEPTNHLDIETIDALGRAINAFK 658
            .||.......:..:.::.||||:|:|:|..|..:.....||||||||||||.:.:.|..|||.:|
plant   512 LLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYK 576

  Fly   659 GGVILVSHDERLIKVVCKELWVCGNRTVRAIEGGLDEYKRE----VYKEIEANS 708
            |.||.||||...||.:.       ||.:...:|||.:|..:    :.|.:||.:
plant   577 GTVITVSHDRYFIKQIV-------NRVIEVRDGGLMDYAGDYNYFLEKNVEARA 623

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9330	NP_649129.1	PLN03073	1..698	CDD:215558	182/558 (33%)
		ABCF_EF-3	178..401	CDD:213188	78/237 (33%)
		ABC_tran_Xtn	395..480	CDD:289608	26/89 (29%)
		ABCF_EF-3	491..685	CDD:213188	64/195 (33%)
ABCF2	NP_196555.2	ABCF_EF-3	84..314	CDD:213188	78/232 (34%)
		Uup	85..617	CDD:223562	177/548 (32%)
		ABC_tran_Xtn	313..400	CDD:289608	26/89 (29%)
		ABCF_EF-3	411..603	CDD:213188	65/202 (32%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0488
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D580544at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100624
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.720