DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9330 and ABCF4

DIOPT Version :9

Sequence 1:NP_649129.1 Gene:CG9330 / 40131 FlyBaseID:FBgn0036888 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_001327731.1 Gene:ABCF4 / 824619 AraportID:AT3G54540 Length:723 Species:Arabidopsis thaliana


Alignment Length:650 Identity:264/650 - (40%)
Similarity:375/650 - (57%) Gaps:47/650 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EEMAKNMER-LDKDMQSIWVANKDGANKVDSKKLGKAEAKLQQKQEKRQEVNK--HGMIPVAVKL 151
            ||..|...| |..:.:.:.::..|   |...|:..|....||..:..::|..|  |....|.:..
plant    84 EERQKEARRKLKSEQRHLEISVTD---KEQKKREAKERLALQAAESAKREAMKDDHDAFTVVIGS 145

  Fly   152 QTATASQVTNKKNTKLDQKGLNRSMDIKIENFDLAFGEKVLLQNANLLLSYGRRYGLVGRNGLGK 216
            :|:....         |........||.||:|.::...|.||:||::.:|:|:||||:|.||:||
plant   146 KTSVLEG---------DDMADANVKDITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGK 201

  Fly   217 TTLLRMIAERQLQIPSHISVLHVEQEVVGDDTPAVESVLECDTERTRLLTREKEILAALNNGVQD 281
            :|||:::|.|::.:|.:|.||.||||||||:..|:.:|:..:.|..: |..|.|.|...::|...
plant   202 STLLKLLAWRKIPVPKNIDVLLVEQEVVGDEKSALNAVVSANEELVK-LREEAEALQKSSSGADG 265

  Fly   282 ATLSNE--------LSETYASLQNIEADKAVARASVILKGLGFDADMQLRPTKSFSGGWRMRLAL 338
            ..:..|        |:|.|..||.:.:|.|.|:||.||.||||..|||:|.|:|||||||||::|
plant   266 ENVDGEDDDDTGEKLAELYDRLQILGSDAAEAQASKILAGLGFTKDMQVRATQSFSGGWRMRISL 330

  Fly   339 ARALFSKPDLLLLDEPTNMLDIKAIIWLENYLQTWATTILVVSHDRNFLDTVPTDIIHLHSQELE 403
            |||||.:|.|||||||||.||::|::|||.||..|..|::||||||:||:||.|:|||||.|.|.
plant   331 ARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQNLH 395

  Fly   404 AYKGNYEQFEKTKTEKLKSQRRE---YEAQM------AHRAHVQDFIDRFRYN-ANRASSVQSKI 458
            .|:||::.||....::.|...::   |:.||      .:|...:...||.::. |..||..:||.
plant   396 FYRGNFDGFESGYEQRRKEMNKKFDVYDKQMKAAKRTGNRGQQEKVKDRAKFTAAKEASKSKSKG 460

  Fly   459 KMLEK---LPELKPVEKETVVTLKFPEVEPLNPPVLAISEVTFRYNPEDPLPIFKGVNLSATSDS 520
            |.:::   .||.....::..|...|||...|.||:|.:.||:|.| |..|......|::.....:
plant   461 KTVDEEGPAPEAPRKWRDYSVVFHFPEPTELTPPLLQLIEVSFSY-PNRPDFRLSNVDVGIDMGT 524

  Fly   521 RICIVGENGAGKSTLLKIIVGQLSTIHGNIVLHRGLRIGYFAQHHVDHLNMNVTCVGVLAELFPG 585
            |:.|||.|||||||||.::.|.|....|.:...:.||||.::||.||.|.|..|.|..|..|.|.
plant   525 RVAIVGPNGAGKSTLLNLLAGDLVPTEGEMRRSQKLRIGRYSQHFVDLLTMGETPVQYLLRLHPD 589

  Fly   586 R----PDEEYRRQLGSFGISGPLALQSIASLSGGQKSRVALAKMCMAEPNFLVLDEPTNHLDIET 646
            :    ..|..|.:||.||:.....|..||.||||||:||....:.|::|:.|:|||||||||:::
plant   590 QEGFSKQEAVRAKLGKFGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQS 654

  Fly   647 IDALGRAINAFKGGVILVSHDERLIKVVCKE-----LWVCGNRTVRAIEGGLDEYKREVYKEIEA 706
            ||||..|::.|.|||:|||||.|||..||.|     :||..:.||....|..:|||.::.:||:|
plant   655 IDALADALDEFTGGVVLVSHDSRLISRVCAEEEKSQIWVVEDGTVNFFPGTFEEYKEDLQREIKA 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9330NP_649129.1 PLN03073 1..698 CDD:215558 260/640 (41%)
ABCF_EF-3 178..401 CDD:213188 118/230 (51%)
ABC_tran_Xtn 395..480 CDD:289608 27/97 (28%)
ABCF_EF-3 491..685 CDD:213188 90/202 (45%)
ABCF4NP_001327731.1 PLN03073 45..714 CDD:215558 261/643 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D580544at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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