DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9330 and abcf1

DIOPT Version :9

Sequence 1:NP_649129.1 Gene:CG9330 / 40131 FlyBaseID:FBgn0036888 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_998351.1 Gene:abcf1 / 406467 ZFINID:ZDB-GENE-050517-31 Length:877 Species:Danio rerio


Alignment Length:768 Identity:286/768 - (37%)
Similarity:399/768 - (51%) Gaps:127/768 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ESGDDIFEAVGDILQSVDCDRSEESVRTLCEQFLNIMKNNEVNVERKVLNAPVNIEEMAKNMERL 99
            :|.|:..||.||     |.|..::..|:         |.:...|| ||.......:...|.::..
Zfish   129 QSDDEDDEAGGD-----DDDDDDDKPRS---------KKSSKEVE-KVAKGKKKDKPKPKPIKEA 178

  Fly   100 DKDMQSIWVANKDGANKVDSKKLGKA-------------EAKLQQKQEKR--------------- 136
            .:|.|......||...|...||..||             |.|.|:|.:|:               
Zfish   179 SEDEQDEGAEKKDENEKKGGKKGKKAAAAAKPSKEEDDIEEKEQEKSQKKGKKEPPKKGKPARPP 243

  Fly   137 ------QEVNKHGMIPVAVKLQTATASQVTNKKN--------TKLDQKG---------------- 171
                  :|..|.....:.:..:.|.|:|...:|.        :|.::|.                
Zfish   244 PSDDDEEEEEKSDDNDIMMSAEDAIAAQEAKEKQEDDPFANMSKKEKKKKKKIMEYERQVASVRA 308

  Fly   172 ---------------------LNRSMDIKIENFDLAFGEKVLLQNANLLLSYGRRYGLVGRNGLG 215
                                 |..:.|||:|.|.::...|.|..||:||:..||||||||.||.|
Zfish   309 QNAIEGDFSVSQAELSSRQAMLENASDIKLERFSISAHGKELFVNADLLIVAGRRYGLVGPNGKG 373

  Fly   216 KTTLLRMIAERQLQIPSHISVLHVEQEVVGDDTPAVESVLECDTERTRLLTREKEILAALNNGVQ 280
            |||||:.||.|.|.||.:|.||..|||||.||||||::||:.||.|.:||..|:::.:.|..|  
Zfish   374 KTTLLKHIANRALSIPPNIDVLLCEQEVVADDTPAVQAVLKADTRRLKLLEEERQLQSRLEKG-- 436

  Fly   281 DATLSNELSETYASLQNIEADKAVARASVILKGLGFDADMQLRPTKSFSGGWRMRLALARALFSK 345
            |.::|..|.:.|..|:.|.|..|.|:|..||.||.|..:||.||||.||||||||::||||||.:
Zfish   437 DDSVSERLDKVYEELRAIGAAAAEAKARRILAGLSFTPEMQNRPTKKFSGGWRMRVSLARALFME 501

  Fly   346 PDLLLLDEPTNMLDIKAIIWLENYLQTWATTILVVSHDRNFLDTVPTDIIHLHSQELEAYKGNYE 410
            |.||:||||||.||:.|:|||.||||:|..|:|:||||::|||.|.||||||.:|:|..|:|||.
Zfish   502 PTLLMLDEPTNHLDLNAVIWLNNYLQSWKKTLLIVSHDQSFLDDVCTDIIHLDNQKLYYYRGNYL 566

  Fly   411 QFEKTKTEKLKSQRREYEAQMAHRAHVQDFIDRFRYNANRASSVQSKIKMLEKL----------- 464
            .|:|...:|.|..:::|:.|   ...::|.      .|...|:.|::.:..|.|           
Zfish   567 TFKKMYIQKQKELQKQYDKQ---EKKLKDL------KAGGKSTKQAEKQTKEALTRKQQKGKKKS 622

  Fly   465 --------PELKPVEKETVVTLKFPEVEPLNPPVLAISEVTFRYNPEDPLPIFKGVNLSATSDSR 521
                    .||....||..|...||...||:||:|.:..|.|.|  |...|:||.|:.....:||
Zfish   623 QEEESHEATELLKRPKEYTVKFTFPNPPPLSPPILGLHSVDFGY--EGQKPLFKNVDFGIDMESR 685

  Fly   522 ICIVGENGAGKSTLLKIIVGQLSTIHGNIVLHRGLRIGYFAQHHVDHLNMNVTCVGVLAELFPGR 586
            |||||.||.||||||.::.|:|:...|.:..:..|::|:|.|.:.|.|||:......|...| ..
Zfish   686 ICIVGPNGVGKSTLLLLLTGKLNPTKGEMRKNHRLKVGFFNQQYADQLNMDEAATEYLQRNF-NL 749

  Fly   587 PDEEYRRQLGSFGISGPLALQSIASLSGGQKSRVALAKMCMAEPNFLVLDEPTNHLDIETIDALG 651
            ..::.|:.||.||:........|:.||||||:||..:::...:|:.|:||||||:||||:||||.
Zfish   750 QYQDSRKCLGRFGLESHAHTIQISKLSGGQKARVVFSELSCRQPDVLILDEPTNNLDIESIDALS 814

  Fly   652 RAINAFKGGVILVSHDERLIKVVCKELWVCGNRTVRAIEGGLDEYKREVYKEI 704
            .|||.:||.||:||||.|||.....:|||..::::..|:|..::|||||.:.:
Zfish   815 EAINEYKGAVIIVSHDARLITETQCQLWVVEDQSINQIDGDFEDYKREVLEAL 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9330NP_649129.1 PLN03073 1..698 CDD:215558 282/760 (37%)
ABCF_EF-3 178..401 CDD:213188 127/222 (57%)
ABC_tran_Xtn 395..480 CDD:289608 26/103 (25%)
ABCF_EF-3 491..685 CDD:213188 84/193 (44%)
abcf1NP_998351.1 Uup 334..865 CDD:223562 248/544 (46%)
ABCF_EF-3 336..557 CDD:213188 127/222 (57%)
ABC_tran_Xtn 551..>604 CDD:289608 19/61 (31%)
ABCF_EF-3 659..847 CDD:213188 83/190 (44%)
P-loop_NTPase <739..>806 CDD:304359 24/67 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.830

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