DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9330 and abcf-1

DIOPT Version :9

Sequence 1:NP_649129.1 Gene:CG9330 / 40131 FlyBaseID:FBgn0036888 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_506192.1 Gene:abcf-1 / 179748 WormBaseID:WBGene00006512 Length:622 Species:Caenorhabditis elegans


Alignment Length:624 Identity:264/624 - (42%)
Similarity:367/624 - (58%) Gaps:51/624 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 DGANKVDSKKLGKAEAK-------------LQQKQEKRQEVNKHGMIPVAVKLQT-ATASQVTNK 162
            |...|:..|:..||:||             ::...|...:..:||.|....:|.. .|.||: :|
 Worm     3 DAGKKISRKEAKKAKAKENYDKTILSMGGVVENLPEVEGDQEEHGGIGSGAELGAHFTVSQL-SK 66

  Fly   163 KNTKLDQKGLNRSMDIKIENFDLAFGEKVLLQNANLLLSYGRRYGLVGRNGLGKTTLLRMIAERQ 227
            ..|:|.|  :..||||||||||::...|:|...|:|.:.|||||||||.||:||||||:.|..|:
 Worm    67 TGTQLAQ--MENSMDIKIENFDISAQGKLLFDKASLTIVYGRRYGLVGPNGMGKTTLLKHIGARK 129

  Fly   228 LQIPSHISVLHVEQEVVGDDTPAVESVLECDTERTRLLTREKEILAALNNGVQDATLSNELSETY 292
            |.|||||.:|:.|||:..|.|.|:::|::.|.:|..||..|.::::.:..|..:|  :..:.|..
 Worm   130 LAIPSHIDLLYCEQEIQVDSTSAIDTVVKSDKKRLALLEEEAKLMSEIEEGKTEA--AERMKEVA 192

  Fly   293 ASLQNIEADKAVARASVILKGLGFDADMQLRPTKSFSGGWRMRLALARALFSKPDLLLLDEPTNM 357
            ..|::|.||.|..||..||.||||..:||.:|...||||||||::||||||.:|.||:||||||.
 Worm   193 DELRDIGADSAEPRARRILAGLGFSKEMQEKPCTDFSGGWRMRISLARALFLEPTLLMLDEPTNH 257

  Fly   358 LDIKAIIWLENYLQTWATTILVVSHDRNFLDTVPTDIIHLHSQELEAYKGNYEQFEKTKTEKLKS 422
            ||:.|:|||:||||||..|:|:||||:.|||:|.||||||.:|:|..|:|||..|:|...:.::.
 Worm   258 LDLNAVIWLDNYLQTWKKTLLIVSHDQGFLDSVCTDIIHLDNQKLHTYRGNYTLFKKQYAQDMQV 322

  Fly   423 QRREYEAQMAHRAHVQDFIDRFRYNANRASSVQSKIK--MLEK-------------------LPE 466
            ..:.::.|       |..:...:.....|...:.::|  |..|                   .||
 Worm   323 HEKNFDQQ-------QKQLKAMKKEGKSAKQAEEQVKQQMANKAKKGGKKNAGKVNDDDDAGAPE 380

  Fly   467 LKPVEKETVVTLKFPEVEPLNPPVLAISEVTFRYNPEDPLPIFKGVNLSATSDSRICIVGENGAG 531
            |....||..|..:|||...||||||.:.:|.|.|..:   .:||.:|.....||||.|||.||.|
 Worm   381 LLQRRKEYSVKFQFPETTKLNPPVLGLHDVNFGYGKD---VLFKKLNFGVDMDSRIAIVGPNGVG 442

  Fly   532 KSTLLKIIVGQLSTIHGNIVLHRGLRIGYFAQHHVDHLNMNVTCVGVLAELFPGRPDEEYRRQLG 596
            ||||||:::|::....|.:..||.||||:|.||..:.||...|.|..|...| ....:|.|:|||
 Worm   443 KSTLLKLLIGKIDPNDGELRKHRTLRIGWFDQHANEALNGEQTPVEFLCTKF-NIDYQEARKQLG 506

  Fly   597 SFGISGPLALQSIASLSGGQKSRVALAKMCMAEPNFLVLDEPTNHLDIETIDALGRAINAFKGGV 661
            :.|::.......|..|||||||||||..:.:..|:.::||||||:||||:||||..||..|.|||
 Worm   507 TTGLAAHAHTVKIKDLSGGQKSRVALCNLALGGPDIIILDEPTNNLDIESIDALAEAIRDFNGGV 571

  Fly   662 ILVSHDERLIKVVCKELWVCGNRTVRAIEGGLDEYKREV 700
            ::|:|||||:......|||..|:.:..|:|..::||:||
 Worm   572 VMVTHDERLVVRTDCNLWVVENQGIDEIDGDFEDYKKEV 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9330NP_649129.1 PLN03073 1..698 CDD:215558 261/620 (42%)
ABCF_EF-3 178..401 CDD:213188 119/222 (54%)
ABC_tran_Xtn 395..480 CDD:289608 23/105 (22%)
ABCF_EF-3 491..685 CDD:213188 89/193 (46%)
abcf-1NP_506192.1 Uup 77..609 CDD:223562 243/544 (45%)
ABCF_EF-3 80..301 CDD:213188 119/222 (54%)
ABC_tran_Xtn 295..>353 CDD:289608 14/64 (22%)
ABCF_EF-3 407..595 CDD:213188 88/191 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I6994
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

Return to query results.
Submit another query.