DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9330 and abcf-2

DIOPT Version :9

Sequence 1:NP_649129.1 Gene:CG9330 / 40131 FlyBaseID:FBgn0036888 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_499779.1 Gene:abcf-2 / 176771 WormBaseID:WBGene00012097 Length:622 Species:Caenorhabditis elegans


Alignment Length:613 Identity:226/613 - (36%)
Similarity:358/613 - (58%) Gaps:31/613 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KDGANKVDSKKLGKAEAKLQQKQEKR-------------QEVNKHGMIPVAVKLQTATASQVTNK 162
            ::.|.|..:|. ||.:.|::......             :|:::.......::|:.|.|..|...
 Worm     9 REAAKKAAAKG-GKGKKKVETPTAMSSQHPSVNSLCCLDEELDQAAATLAKIELENAAARSVAGS 72

  Fly   163 KNTKLDQKGLNRSMDIKIENFDLAFGEKVLLQNANLLLSYGRRYGLVGRNGLGKTTLLRMIAERQ 227
            ..:  |.|||    |.::|:..:.|..:.::.:..|.|:.||||||:|.||.||:|:::.|..::
 Worm    73 LTS--DPKGL----DHRVESLTITFHGREIVVDTKLELNRGRRYGLIGLNGSGKSTIIQAIYNKE 131

  Fly   228 LQIPSHISVLHVEQEVVGDDTPAVESVLECDTERTRLLTREKEILAALNNGVQDATLSNELSETY 292
            :.||..:.:..|.:|:...:..|:::|::.|:.|     :|.|.||.......|....::|.:.|
 Worm   132 MPIPESVDMYLVSREMPASEKTALQAVVDVDSVR-----KELEHLAEQLASQTDEESQDKLMDVY 191

  Fly   293 ASLQNIEADKAVARASVILKGLGFDADMQLRPTKSFSGGWRMRLALARALFSKPDLLLLDEPTNM 357
            ..|..::|..|..:|:.||.||||...||::..|.||||||||:|||||||.||.:||||||||.
 Worm   192 ERLDEMDASLAEKKAAEILHGLGFTKTMQMKKCKDFSGGWRMRIALARALFLKPSVLLLDEPTNH 256

  Fly   358 LDIKAIIWLENYLQTWATTILVVSHDRNFLDTVPTDIIHLHSQELEAYKGNYEQFEKTKTEKLKS 422
            ||::|.:|||..|..:..|:|||||.::|::.|.|:||||..::|..|.|||:||.||:.|.|::
 Worm   257 LDLEACVWLEEELAQYKRTLLVVSHSQDFMNGVCTNIIHLFQKQLVYYGGNYDQFVKTRLELLEN 321

  Fly   423 QRREYEAQMAHRAHVQDFIDRFRY-NANRASSVQSKIKMLEKLPELKPVEK---ETVVTLKFPEV 483
            |::.|..:.:...|::|::.||.: :|..|...|||.|.:.|:......||   |||....|.:.
 Worm   322 QQKRYNWEQSQLQHMKDYVARFGHGSAKLARQAQSKEKTMAKMIAGGLAEKAVTETVKQFYFFDA 386

  Fly   484 EPLNPPVLAISEVTFRYNPEDPLPIFKGVNLSATSDSRICIVGENGAGKSTLLKIIVGQLSTIHG 548
            ..:.|||:.:..|:||||...|. |:|.::.....|:||.:||.||||||||||::...:....|
 Worm   387 GEIPPPVIMVQHVSFRYNENTPW-IYKDIDFGIDLDTRIALVGPNGAGKSTLLKLLCTDVMPTDG 450

  Fly   549 NIVLHRGLRIGYFAQHHVDHLNMNVTCVGVLAELFPG-RPDEEYRRQLGSFGISGPLALQSIASL 612
            .|..|...:||.:.||..:.|.::::.:..:.:.||. :..||.|:.:|.:||:|...:..:..|
 Worm   451 LIRRHSHCKIGRYHQHLHEELPLDLSALEFMMKEFPDVKEKEEMRKIVGRYGITGREQVCPMKQL 515

  Fly   613 SGGQKSRVALAKMCMAEPNFLVLDEPTNHLDIETIDALGRAINAFKGGVILVSHDERLIKVVCKE 677
            |.||:.||:.|.:...:|:.|:|||||||||:|:||||..|||.|.||:||||||.||:..|.:|
 Worm   516 SDGQRCRVSFAWLAWQQPHLLLLDEPTNHLDMESIDALAEAINCFPGGMILVSHDFRLVSQVAEE 580

  Fly   678 LWVCGNRTVRAIEGGLDEYKREVYKEIE 705
            :|||.|:.:...:|.:..:|..:.|:|:
 Worm   581 VWVCDNQGILKWDGDIFSFKEHLRKQID 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9330NP_649129.1 PLN03073 1..698 CDD:215558 223/604 (37%)
ABCF_EF-3 178..401 CDD:213188 90/222 (41%)
ABC_tran_Xtn 395..480 CDD:289608 32/88 (36%)
ABCF_EF-3 491..685 CDD:213188 83/194 (43%)
abcf-2NP_499779.1 Uup 83..601 CDD:223562 207/523 (40%)
ABCF_EF-3 83..296 CDD:213188 88/217 (41%)
ABC_tran_Xtn 294..364 CDD:289608 26/69 (38%)
ABCF_EF-3 394..588 CDD:213188 83/194 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0000863
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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