DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9330 and abcf-3

DIOPT Version :9

Sequence 1:NP_649129.1 Gene:CG9330 / 40131 FlyBaseID:FBgn0036888 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_498339.1 Gene:abcf-3 / 175873 WormBaseID:WBGene00018339 Length:712 Species:Caenorhabditis elegans


Alignment Length:716 Identity:360/716 - (50%)
Similarity:490/716 - (68%) Gaps:35/716 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LQREFPKIDHELLTYVVGVLTGSEEDFESGDDIFEAVGDILQSVDCDRSEESVRTLCEQFLNIM- 71
            |...||.:..|:..||..:|..:.::..|.|::.:|||:.||:...:..|...:..|:|.|.:: 
 Worm    11 LTATFPTLPIEIKDYVSAILKENSDEITSLDEVMDAVGEHLQASVENLCEVGAKNACQQLLKLLH 75

  Fly    72 --------KNNEVNVERKVLNAPVNIEEMAKNMERLDKDMQSIW-VANKDGANKVDSKKLGKAEA 127
                    |..|...:|  |...|::....:|.|.|    |||| |..:|....||.|||.|||.
 Worm    76 GDNLPKAIKQQEATTKR--LEQTVDMAAENQNFEAL----QSIWKVQTRDTPTTVDKKKLAKAED 134

  Fly   128 KLQQKQEKRQEVNKHGMIPVAVKLQ----TATASQVTNKKNTKLDQKGLNRSMDIKIENFDLAFG 188
            :...|.|.|.:.      ||..|.:    :|||||...:.:   ..:|.| |.|||:|:.|::.|
 Worm   135 RAAAKAEARADA------PVERKKKKNEPSATASQAPIRDS---GARGAN-SKDIKLESVDISIG 189

  Fly   189 EKVLLQNANLLLSYGRRYGLVGRNGLGKTTLLRMIAERQLQIPSHISVLHVEQEVVGDDTPAVES 253
            .|.||..|::.:::|||||||||||:||||||:||:.:||:||:.||:|.|||||.||||..:::
 Worm   190 TKQLLSCADVTMAFGRRYGLVGRNGIGKTTLLKMISSQQLKIPAGISMLSVEQEVEGDDTLVLDA 254

  Fly   254 VLECDTERTRLLTREKEILAALN----NGVQDATLSNELSETYASLQNIEADKAVARASVILKGL 314
            ||..||:|..||.|||.:.:.:|    |..:....::|||:.|..::.::.|||.||||.:|.||
 Worm   255 VLMSDTKRQTLLDREKTLQSRINKDNINDAEKTKWNDELSKLYIEMEALQLDKAPARASSLLYGL 319

  Fly   315 GFDADMQLRPTKSFSGGWRMRLALARALFSKPDLLLLDEPTNMLDIKAIIWLENYLQTWATTILV 379
            ||..|.|.||||.||||||||:|||||||.|||||||||||||||::|:.|||.:||.|..|||.
 Worm   320 GFTPDEQKRPTKEFSGGWRMRVALARALFVKPDLLLLDEPTNMLDMRAVYWLEGHLQGWEGTILT 384

  Fly   380 VSHDRNFLDTVPTDIIHLHSQELEAYKGNYEQFEKTKTEKLKSQRREYEAQMAHRAHVQDFIDRF 444
            |||||.||:.:.|||:|||::.|:.|||||:|||||..|||..|:||||:|...|.|.|:|||:|
 Worm   385 VSHDRKFLNEICTDIVHLHTRRLDHYKGNYDQFEKTMKEKLTQQQREYESQQQLRQHTQEFIDKF 449

  Fly   445 RYNANRASSVQSKIKMLEKLPELKPVEKETVVTLKFPEVEPLNPPVLAISEVTFRYNPEDPLPIF 509
            ||||.||..|||:||||||||.|.|||.|:.:..||||.|.|:.|||.:.||:||||.:.|. :|
 Worm   450 RYNAKRAPMVQSRIKMLEKLPVLLPVELESDIHFKFPECEVLSNPVLQLDEVSFRYNEDSPY-LF 513

  Fly   510 KGVNLSATSDSRICIVGENGAGKSTLLKIIVGQLSTIHGNIVLHRGLRIGYFAQHHVDHLNMNVT 574
            :.:||...::|||||||||||||:||||:::..|....|...::|.:||.||.|||||.|:|..:
 Worm   514 RKLNLGTHANSRICIVGENGAGKTTLLKLLLDDLQPSVGLRNVNRRIRIAYFTQHHVDQLDMETS 578

  Fly   575 CVGVLAELFPGRPDEEYRRQLGSFGISGPLALQSIASLSGGQKSRVALAKMCMAEPNFLVLDEPT 639
            .:.||.:..||:..|:||..||.||::|.:||||:.:||||||||:|.|.:.:.:||:|:|||||
 Worm   579 AIEVLMKNHPGKTQEDYRAALGRFGLAGDMALQSVETLSGGQKSRLAFANLALMQPNYLILDEPT 643

  Fly   640 NHLDIETIDALGRAINAFKGGVILVSHDERLIKVVCKELWVCGNRTVRAIEGGLDEYKREVYKEI 704
            ||||:||::|||:|:|.|.|||:||||||:||::|||||||..:|.|..:||||:||:::|||::
 Worm   644 NHLDVETVEALGKALNVFNGGVVLVSHDEQLIELVCKELWVVKDRMVTTLEGGLEEYRKQVYKQL 708

  Fly   705 E 705
            :
 Worm   709 Q 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9330NP_649129.1 PLN03073 1..698 CDD:215558 357/707 (50%)
ABCF_EF-3 178..401 CDD:213188 131/226 (58%)
ABC_tran_Xtn 395..480 CDD:289608 52/84 (62%)
ABCF_EF-3 491..685 CDD:213188 106/193 (55%)
abcf-3NP_498339.1 PLN03073 22..702 CDD:215558 353/696 (51%)
ABCF_EF-3 179..406 CDD:213188 131/226 (58%)
ABC_tran_Xtn 400..483 CDD:289608 52/82 (63%)
ABCF_EF-3 496..688 CDD:213188 106/192 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165999
Domainoid 1 1.000 187 1.000 Domainoid score I1988
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22784
Inparanoid 1 1.050 672 1.000 Inparanoid score I377
Isobase 1 0.950 - 0 Normalized mean entropy S692
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0000863
OrthoInspector 1 1.000 - - oto18142
orthoMCL 1 0.900 - - OOG6_100624
Panther 1 1.100 - - LDO PTHR19211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1720
SonicParanoid 1 1.000 - - X3793
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

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