DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9330 and abcf1

DIOPT Version :9

Sequence 1:	NP_649129.1	Gene:	CG9330 / 40131	FlyBaseID:	FBgn0036888	Length:	708	Species:	Drosophila melanogaster
Sequence 2:	XP_002939514.2	Gene:	abcf1 / 100490104	XenbaseID:	XB-GENE-993168	Length:	884	Species:	Xenopus tropicalis

Alignment Length:	778	Identity:	293/778 - (37%)
Similarity:	405/778 - (52%)	Gaps:	120/778 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 SEEDFE------------SGDDIFEA-VGDILQSVDCDRSEESVRTLCEQFLNIMKNNEVNVERK 81
            |:||.|            .|.:||.| |.|  ||.|.:..|:....:.|:..:..|.|.....:.
Frog   112 SDEDEEPDVKPAPKAGKKQGSNIFAALVED--QSDDEEEEEQVSNQVDEKKQSKGKKNVKGKHKA 174

  Fly    82 VLNAPVNIEEMAKNMERLDKDMQSIWVANKDGANKVD---------SKKLGKAEAKLQQKQEKRQ 137
            ....|.:.|::.|...:..|.:.|....|::...|.:         .|.:.|| |.::..:||:.
Frog   175 PEERPESEEDIPKEKSKGKKPVPSAASVNEEDEKKTEKGNKKSKPSQKPVSKA-ASVESDEEKKP 238

  Fly   138 E---------VNKHGMIPV---------------------------------------------A 148
            |         .|:.|.:.:                                             .
Frog   239 EKGSKKTKPSQNRFGALDIEEDHVSGGSKEGSGDEGETEDKTTAAEDPFANLSKKEKKKKKKMLE 303

  Fly   149 VKLQTATASQVTNKKN------TKLD--QKGLNRSMDIKIENFDLAFGEKVLLQNANLLLSYGRR 205
            .:.|.||..::|..:|      .:|.  |..|..:.|||||.|.::...|.|..||:|.:..|||
Frog   304 YEKQVATMKKITAAENDFSVSQAELSSRQAMLENASDIKIEKFSISAHGKELFVNADLYVVAGRR 368

  Fly   206 YGLVGRNGLGKTTLLRMIAERQLQIPSHISVLHVEQEVVGDDTPAVESVLECDTERTRLLTREKE 270
            |||||.||.||||||:.||.:.|.||.:|.||..|||||.||||||::||:.|.:|.:||..|::
Frog   369 YGLVGPNGKGKTTLLKHIANKALNIPPNIDVLLCEQEVVADDTPAVQAVLKADKKRLKLLEEERK 433

  Fly   271 ILAALNNGVQDATLSNELSETYASLQNIEADKAVARASVILKGLGFDADMQLRPTKSFSGGWRMR 335
            :...|..|  |...:..|.:.|..|:.:.|..|.|:|..||.||||..:||.|.|:.||||||||
Frog   434 LQTRLEKG--DDNAAERLEKVYEELRAMGAASAEAKARRILAGLGFTPEMQDRETRRFSGGWRMR 496

  Fly   336 LALARALFSKPDLLLLDEPTNMLDIKAIIWLENYLQTWATTILVVSHDRNFLDTVPTDIIHLHSQ 400
            ::||||||.:|.||:||||||.||:.|:|||.||||.|..|:|:||||:.|||.|.|||:||.||
Frog   497 VSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWKKTLLIVSHDQGFLDDVCTDIMHLDSQ 561

  Fly   401 ELEAYKGNYEQFEKTKTEKLKSQRREYEAQMAHRAHVQDFIDRFRYNANRASSVQSKIKMLEKLP 465
            :|..|:|||..|:|...:|.|..:::|:.|   ...::|.      .|...|:.|::.:..|.|.
Frog   562 KLYYYRGNYMTFKKMYQQKQKELQKQYDKQ---EKKLKDL------KAGGKSAKQAEKQTKEALT 617

  Fly   466 ELK--------------PVE-----KETVVTLKFPEVEPLNPPVLAISEVTFRYNPEDPLPIFKG 511
            ..:              |||     ||..|...||...||:||:|.:..|.|.|:.:.||  ||.
Frog   618 RKQQKCQKKNNDKEDNDPVELLKRPKEYTVKFTFPNPPPLSPPILGLHGVDFCYSGQKPL--FKN 680

  Fly   512 VNLSATSDSRICIVGENGAGKSTLLKIIVGQLSTIHGNIVLHRGLRIGYFAQHHVDHLNMNVTCV 576
            ::.....|||:||||.||.||||||.::.|:|:...|.:..:..|:||:|.|.:.|.|||..|..
Frog   681 LDFGIDMDSRVCIVGPNGVGKSTLLLLLTGKLTPTKGEMRKNHRLKIGFFNQQYADQLNMEETAT 745

  Fly   577 GVLAELFPGRPDEEYRRQLGSFGISGPLALQSIASLSGGQKSRVALAKMCMAEPNFLVLDEPTNH 641
            ..|...| ..|.::.|:.||.||:........|..||||||:||..|::|..||:.|:||||||:
Frog   746 EYLQRNF-NLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELCCREPDVLILDEPTNN 809

  Fly   642 LDIETIDALGRAINAFKGGVILVSHDERLIKVVCKELWVCGNRTVRAIEGGLDEYKREVYKEI 704
            ||||:||||..|:|.:||.||.||||.|||......|||..::||..|||..|:|||||.:.:
Frog   810 LDIESIDALAEAVNEYKGAVITVSHDARLITETNCHLWVVEDQTVNQIEGDFDDYKREVLESL 872

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9330	NP_649129.1	PLN03073	1..698	CDD:215558	289/770 (38%)
		ABCF_EF-3	178..401	CDD:213188	122/222 (55%)
		ABC_tran_Xtn	395..480	CDD:289608	27/103 (26%)
		ABCF_EF-3	491..685	CDD:213188	88/193 (46%)
abcf1	XP_002939514.2	LYRIC	<157..>251	CDD:374019	17/94 (18%)
abcf1	XP_002939514.2	Uup	339..870	CDD:223562	252/544 (46%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D249617at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010