DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9330 and abcf3

DIOPT Version :9

Sequence 1:NP_649129.1 Gene:CG9330 / 40131 FlyBaseID:FBgn0036888 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_001120542.1 Gene:abcf3 / 100145696 XenbaseID:XB-GENE-6087270 Length:711 Species:Xenopus tropicalis


Alignment Length:708 Identity:418/708 - (59%)
Similarity:546/708 - (77%) Gaps:10/708 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEYTSILQREFPKIDHELLTYVVGVLTGSEEDFESGDDIFEAVGDILQSVDCD-RSEESVRTLC 64
            |:.:..||:.|||::|.|||.||..:|.....||||..|:|||||::||.|..| :.::.:|.:|
 Frog     1 MATFVDILRNEFPQLDAELLQYVTDILDSGRADFESETDLFEAVGELLQDVSRDTKDDDDIRDIC 65

  Fly    65 EQFLNIM--KNNEVNVERKV-LNAPVNIEEMAKNMERLDKDMQSIWVANKDGANKVDSKKLGKAE 126
            ::....|  :|:::..:.:| |.||:.:.:::.:.| :|:.:|::.:..||.::.||.|:|.|||
 Frog    66 QRIYRAMHLENHQLPAQDQVLLQAPIQLSKISDSYE-VDEKIQNVMLLKKDQSSTVDVKRLEKAE 129

  Fly   127 AKLQQKQEKRQEVNKHGMIPVAVKLQTATASQVTNKKNTKLDQKGLNRSMDIKIENFDLAFGEKV 191
            |||:.|||||.|.:........| ::.|:|||..:||..:::..|.|:|.||:|||||::|||:|
 Frog   130 AKLKSKQEKRSERDLQKSTGNVV-MEEASASQAASKKENRIESSGKNKSYDIRIENFDVSFGERV 193

  Fly   192 LLQNANLLLSYGRRYGLVGRNGLGKTTLLRMIAERQLQIPSHISVLHVEQEVVGDDTPAVESVLE 256
            ||..|.|.|:.||||||||||||||||||:|:|.|.|::|||||:|||||||.||:|||::||||
 Frog   194 LLTGAELHLATGRRYGLVGRNGLGKTTLLKMLAGRSLRVPSHISILHVEQEVAGDETPALQSVLE 258

  Fly   257 CDTERTRLLTREKEILAALNNGVQDATLSNELSETYASLQNIEADKAVARASVILKGLGFDADMQ 321
            |||.|.|||..|||:...::.|..|.:.|..|||.|:.|:.||||||.|||||||.||||...||
 Frog   259 CDTLRERLLQEEKELNTKISAGRGDGSESLRLSEIYSKLEEIEADKAPARASVILAGLGFKHSMQ 323

  Fly   322 LRPTKSFSGGWRMRLALARALFSKPDLLLLDEPTNMLDIKAIIWLENYLQTWATTILVVSHDRNF 386
            .:.||.||||||||||||||||::||||||||||||||::||:|||.|||||.:|||||||||||
 Frog   324 QQMTKEFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLECYLQTWPSTILVVSHDRNF 388

  Fly   387 LDTVPTDIIHLHSQELEAYKGNYEQFEKTKTEKLKSQRREYEAQMAHRAHVQDFIDRFRYNANRA 451
            |:.|.|||:|||||.||||:||:|.|.|||.|:||:|:||||||..:|.|:|.||||||||||||
 Frog   389 LNAVATDIVHLHSQRLEAYRGNFESFLKTKEERLKNQQREYEAQQQYREHIQVFIDRFRYNANRA 453

  Fly   452 SSVQSKIKMLEKLPELKPVEKETVVTLKFPE-VEPLNPPVLAISEVTFRYNPEDPLPIFKGVNLS 515
            |.||||:|:||||||||||||:|.|.|:||: .|..:||:|.:.|:.|.|:.:.  |:||.:::|
 Frog   454 SQVQSKLKLLEKLPELKPVEKDTEVILRFPDGFEKFSPPILQLDEIGFWYSSDQ--PVFKNLSVS 516

  Fly   516 ATSDSRICIVGENGAGKSTLLKIIVGQLSTIHGNIVLHRGLRIGYFAQHHVDHLNMNVTCVGVLA 580
            |..|||||:||||||||||:||:::|:||.:.|....||.|:||||:|||||.|::|::.|.:||
 Frog   517 ADLDSRICVVGENGAGKSTMLKLLMGELSPVQGIRNAHRNLKIGYFSQHHVDQLDLNISAVELLA 581

  Fly   581 ELFPGRPDEEYRRQLGSFGISGPLALQSIASLSGGQKSRVALAKMCMAEPNFLVLDEPTNHLDIE 645
            :.|.|:.:||||.||||:||||.||::.:||||||||||||.|:|.|..|||.:|||||||||:|
 Frog   582 KRFSGKTEEEYRHQLGSYGISGELAVRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDME 646

  Fly   646 TIDALGRAINAFKGGVILVSHDERLIKVVCKELWVCGNRTVRAIEGGLDEYKREVYKE 703
            ||:|||||:|.|||||||||||||.|::||:|||||.|..|..||||.||| |.:.:|
 Frog   647 TIEALGRALNKFKGGVILVSHDERFIRLVCQELWVCENGGVTRIEGGFDEY-RNILQE 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9330NP_649129.1 PLN03073 1..698 CDD:215558 416/701 (59%)
ABCF_EF-3 178..401 CDD:213188 157/222 (71%)
ABC_tran_Xtn 395..480 CDD:289608 62/84 (74%)
ABCF_EF-3 491..685 CDD:213188 121/193 (63%)
abcf3NP_001120542.1 PLN03073 1..702 CDD:215558 417/705 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 191 1.000 Domainoid score I3190
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22784
Inparanoid 1 1.050 797 1.000 Inparanoid score I495
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0000863
OrthoInspector 1 1.000 - - oto105109
Panther 1 1.100 - - LDO PTHR19211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1720
SonicParanoid 1 1.000 - - X3793
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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