DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9330 and abcf2b

DIOPT Version :9

Sequence 1:NP_649129.1 Gene:CG9330 / 40131 FlyBaseID:FBgn0036888 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_001188290.1 Gene:abcf2b / 100000576 ZFINID:ZDB-GENE-050506-58 Length:616 Species:Danio rerio


Alignment Length:617 Identity:241/617 - (39%)
Similarity:366/617 - (59%) Gaps:33/617 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 DGANKVDSKKLGKAEAKLQQKQEKRQEVNKHGMI---PVAVKLQTATASQVTNKKNTKLDQKGLN 173
            |.|.|..:||  |..||.:|:.:|..|||..|.:   ||........|:......:.:||:..:.
Zfish     4 DLAKKKAAKK--KEAAKARQRAKKHDEVNGDGELQDDPVNDAETNGDANGDVAALSKELDEFEMR 66

  Fly   174 R---------------SMDIKIENFDLAFGEKVLLQNANLLLSYGRRYGLVGRNGLGKTTLLRMI 223
            :               |.|:.|.:..|.|..:.||.:.:|.|:.||||||:|.||.||:.||..|
Zfish    67 KTEARAVTGVLASHPNSTDVHISSLSLTFHGQELLSDTSLELNSGRRYGLIGLNGTGKSMLLSAI 131

  Fly   224 AERQLQIPSHISVLHVEQEVVGDDTPAVESVLECDTERTRLLTREKEILAALNNGVQDATLSNEL 288
            ..|::.||.||.:.|:.:|:...:..|::.|:|.|.||.: |.:|.|.||      .:.:...:|
Zfish   132 GHREVPIPEHIDIFHLTREMAPSEKTALQCVMEVDEERIK-LEKEAERLA------HEDSECEKL 189

  Fly   289 SETYASLQNIEADKAVARASVILKGLGFDADMQLRPTKSFSGGWRMRLALARALFSKPDLLLLDE 353
            .|.|..|:.::||||..|||.||.||||...||.:..|.||||||||::||||||.||.:|||||
Zfish   190 MEIYERLEELDADKAEVRASRILFGLGFTPAMQRKKLKDFSGGWRMRVSLARALFIKPFMLLLDE 254

  Fly   354 PTNMLDIKAIIWLENYLQTWATTILVVSHDRNFLDTVPTDIIHLHSQELEAYKGNYEQFEKTKTE 418
            |||.||:.|.:|||..|:::...::::||.::||:.|.|:|||||.::|:.|.|||:|:.||:.|
Zfish   255 PTNHLDLDACVWLEEELKSFKRILVLISHSQDFLNGVCTNIIHLHQRKLKYYTGNYDQYVKTREE 319

  Fly   419 KLKSQRREYEAQMAHRAHVQDFIDRFRY-NANRASSVQSKIKMLEKLPE---LKPVEKETVVTLK 479
            ..::|.:.|..:....||::::|.||.: :|..|...|||.|.|:|:..   ...|..:..::..
Zfish   320 LEENQMKRYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKMVASGLTARVMNDKTLSFY 384

  Fly   480 FPEVEPLNPPVLAISEVTFRYNPEDPLPIFKGVNLSATSDSRICIVGENGAGKSTLLKIIVGQLS 544
            ||....:.|||:.:..|:|||:.:..: |:|.:......|:|:.:||.||||||||||:::|:|.
Zfish   385 FPPCGTIPPPVIMVQNVSFRYSSDTQI-IYKNLEFGIDLDTRVALVGPNGAGKSTLLKLLMGELL 448

  Fly   545 TIHGNIVLHRGLRIGYFAQHHVDHLNMNVTCVGVLAELFPG-RPDEEYRRQLGSFGISGPLALQS 608
            ...|.|..|..::||.:.||..:.|.::::.:..:.:.||. :..||.|:.:|.:|::|...:..
Zfish   449 PTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMKCFPEIKEKEEMRKIIGCYGLTGKQQVSP 513

  Fly   609 IASLSGGQKSRVALAKMCMAEPNFLVLDEPTNHLDIETIDALGRAINAFKGGVILVSHDERLIKV 673
            |.:||.|||.||..|.:....|:.|.||||||||||||||||..|||.|:||::|||||.|||:.
Zfish   514 IRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTNHLDIETIDALAEAINEFEGGMMLVSHDFRLIQQ 578

  Fly   674 VCKELWVCGNRTVRAIEGGLDEYKREVYKEIE 705
            |.:|:|||..:|:...:|.:..||..:..:|:
Zfish   579 VAQEIWVCEKQTITKWKGDILAYKEHLKSKID 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9330NP_649129.1 PLN03073 1..698 CDD:215558 239/608 (39%)
ABCF_EF-3 178..401 CDD:213188 101/222 (45%)
ABC_tran_Xtn 395..480 CDD:289608 29/88 (33%)
ABCF_EF-3 491..685 CDD:213188 84/194 (43%)
abcf2bNP_001188290.1 Uup 83..603 CDD:223562 220/527 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0000863
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.830

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