DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcns2

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_076456.1 Gene:Kcns2 / 66022 RGDID:621525 Length:477 Species:Rattus norvegicus


Alignment Length:422 Identity:139/422 - (32%)
Similarity:226/422 - (53%) Gaps:40/422 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DRRKTD--DEKLLINVSGRRFETWRNTLEKYPDTLLG----SNEREFF------YDEDCKEYFFD 86
            |..:||  |.::.|||.|.:.....:||.::|:|.||    .:.||..      ||:..:|::||
  Rat     8 DLSETDVEDGEIRINVGGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFD 72

  Fly    87 RDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDD 151
            |:|::|.::|::|.|||||.....|:.|:.:|:.::||....|..||...|..||.|..:...|:
  Rat    73 RNPELFPYVLHFYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDE 137

  Fly   152 KLSENG-----DQNL-----------QQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVM 200
            :..:..     |:.|           |.|.|.|:::|.|.:||..|..:.||..::...:..|::
  Rat   138 QSDQESTTSSFDEILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSII 202

  Fly   201 ANVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSII 265
            ...:.::|....|...|......|::||    :...:..||.|.:.|...|||..||.::.:::|
  Rat   203 TMCLNSLPDFQIPDSQGNPGEDPRFEIV----EHFGIAWFTFELVARFAVAPDFLKFFKNALNLI 263

  Fly   266 DVVAIMPYYIGLGITDNDDVSGAFV-------TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASE 323
            |:::|:|:||.|.:....:.|....       .||:.|:|||.|.:|||.|||.||.|||....|
  Rat   264 DLMSIVPFYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKE 328

  Fly   324 LGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGG 388
            :|.|:..|::.|.||:.|.:..||..| ....:|||.:|:..|:|||:||||:||.|.|||:...
  Rat   329 VGLLLLYLSVGISIFSVVAYTIEKEEN-EGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLTAS 392

  Fly   389 VCSLSGVLVIALPVPVIVSNFSRIYHQNQRAD 420
            .|.|:|:||:.||:.:|.:.||..|.:.::.:
  Rat   393 ACILAGILVVVLPITLIFNKFSHFYRRQKQLE 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 42/121 (35%)
Ion_trans 188..415 CDD:395416 82/233 (35%)
DUF3399 445..540 CDD:403174
Kcns2NP_076456.1 BTB_POZ_KCNS2 18..124 CDD:349734 35/105 (33%)
Ion_trans 186..421 CDD:395416 84/239 (35%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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