Sequence 1: | NP_001097646.1 | Gene: | Shal / 40129 | FlyBaseID: | FBgn0005564 | Length: | 571 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001257891.1 | Gene: | Kcnd3 / 65195 | RGDID: | 68394 | Length: | 655 | Species: | Rattus norvegicus |
Alignment Length: | 608 | Identity: | 379/608 - (62%) |
---|---|---|---|
Similarity: | 455/608 - (74%) | Gaps: | 56/608 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 ASVAAWLPFARAAAIGWVPIATHPLPPPPMPKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTL 66
Fly 67 LGSNEREFFYDEDCKEYFFDRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGD 131
Fly 132 CCYEDYRDRKRENAERLMDDKLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIA 196
Fly 197 VSVMANVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSV 261
Fly 262 MSIIDVVAIMPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGF 326
Fly 327 LVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCS 391
Fly 392 LSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGAAFVSKKKAAEARWA 456
Fly 457 AQESGIELDDNY-RDEDIFELQHHHLLRCLEKTT------------------------DREFVEL 496
Fly 497 EIPFNGQPKRPGSPSPMASPAHSTNSAAGLLQSCCGRCCSQ------------RYQAC------- 542
Fly 543 --GKYMPAASNAQNSQNNQPMDG 563 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Shal | NP_001097646.1 | BTB_POZ_Shal-like | 6..144 | CDD:349727 | 94/137 (69%) |
Ion_trans | 188..415 | CDD:395416 | 193/226 (85%) | ||
DUF3399 | 445..540 | CDD:403174 | 29/131 (22%) | ||
Kcnd3 | NP_001257891.1 | Interaction with KCNIP2. /evidence=ECO:0000250 | 2..20 | 15/16 (94%) | |
Shal-type | 3..28 | CDD:288455 | 19/24 (79%) | ||
BTB | 42..139 | CDD:197585 | 68/96 (71%) | ||
BTB_2 | 42..131 | CDD:280393 | 62/88 (70%) | ||
Ion_trans | 217..412 | CDD:278921 | 169/194 (87%) | ||
Ion_trans_2 | 328..408 | CDD:285168 | 67/79 (85%) | ||
Selectivity filter. /evidence=ECO:0000250 | 367..372 | 4/4 (100%) | |||
DUF3399 | 442..563 | CDD:288712 | 28/126 (22%) | ||
Mediates dendritic targeting. /evidence=ECO:0000250 | 474..489 | 12/14 (86%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 523..565 | 10/47 (21%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 616..647 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166352828 | |
Domainoid | 1 | 1.000 | 402 | 1.000 | Domainoid score | I709 |
eggNOG | 1 | 0.900 | - | - | E1_COG2126 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 758 | 1.000 | Inparanoid score | I526 |
OMA | 1 | 1.010 | - | - | QHG48930 | |
OrthoDB | 1 | 1.010 | - | - | D221939at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001867 | |
OrthoInspector | 1 | 1.000 | - | - | otm45546 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103639 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11537 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X19 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.770 |