DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and kcnk6

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001025245.2 Gene:kcnk6 / 504083 ZFINID:ZDB-GENE-050309-213 Length:315 Species:Danio rerio


Alignment Length:205 Identity:40/205 - (19%)
Similarity:68/205 - (33%) Gaps:71/205 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 ASELGFLV--FSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAG 383
            ||.:.|:|  |.:.:...:..:::|.|.:..     .|...||::..:::.|:|.||.||....|
Zfish   166 ASVVHFIVLLFLVVLCFFVVPSLVFSAIEET-----WSFLDAFYFCFISLCTIGLGDFVPAEKPG 225

  Fly   384 KIVGGVCSLSGV--LVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGAAFVS 446
            :.:..:..:|.:  |.:.|.|..:|   .|.:|                                
Zfish   226 QSLRALYKISVMVYLFVGLMVMFLV---LRTFH-------------------------------- 255

  Fly   447 KKKAAEARWAAQESGIELDDNYRDEDIFELQHHHLLRCLEKTTDREFVELEIPFNGQPK------ 505
             |.|....|.|                    ..||..|.|...|:|.:....|.:..|:      
Zfish   256 -KLADVYGWTA--------------------FFHLPSCEEDEEDKEPIIEAGPEDDSPEAEKASI 299

  Fly   506 RPGSPSPMAS 515
            :|..||...|
Zfish   300 KPLDPSSQVS 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727
Ion_trans 188..415 CDD:459842 23/97 (24%)
DUF3399 471..535 CDD:463381 12/51 (24%)
kcnk6NP_001025245.2 Ion_trans_2 <89..144 CDD:462301
Ion_trans_2 178..254 CDD:462301 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.

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