DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and KCNS1

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_016883335.1 Gene:KCNS1 / 3787 HGNCID:6300 Length:527 Species:Homo sapiens


Alignment Length:491 Identity:145/491 - (29%)
Similarity:232/491 - (47%) Gaps:69/491 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PPPMPKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTLLG-----SNEREF-----FYDEDCKE 82
            |.|....|.:..||.|.:||.|.|.:.....|.::|.|.||     ::|.:.     .|||..:|
Human    38 PGPDTGIRWRRSDEALRVNVGGVRRQLSARALARFPGTRLGRLQAAASEEQARRLCDDYDEAARE 102

  Fly    83 YFFDRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAER 147
            ::|||.|..|..:|::||||.||.....|:.::.:|..::|:..:.:..||...|.:|:......
Human   103 FYFDRHPGFFLSLLHFYRTGHLHVLDELCVFAFGQEADYWGLGENALAACCRARYLERRLTQPHA 167

  Fly   148 LMDD-------------------KLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGF 193
            ..:|                   :|:..|.....:|   |:::|...|||..|..:.:|..|:..
Human   168 WDEDSDTPSSVDPCPDEISDVQRELARYGAARCGRL---RRRLWLTMENPGYSLPSKLFSCVSIS 229

  Fly   194 FIAVSVMANVVETVP--------CGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFA 250
            .:..|:.|..:.::|        .......||..|.|.|...|...|:..|:..|:.|...||..
Human   230 VVLASIAAMCIHSLPEYQAREAAAAVAAVAAGRSPEGVRDDPVLRRLEYFCIAWFSFEVSSRLLL 294

  Fly   251 APDRCKFVRSVMSIIDVVAIMPYYIGL--GITDNDDVSGAFVTL-------RVFRVFRIFKFSRH 306
            ||....|....:::||:|:::|:|:.|  |:...|.....|..|       |:.|:||:.|.:||
Human   295 APSTRNFFCHPLNLIDIVSVLPFYLTLLAGVALGDQGGKEFGHLGKVVQVFRLMRIFRVLKLARH 359

  Fly   307 SQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTL 371
            |.|||.||.|||....|:|.|:..||:.:.:|:.|.:.|||. ....|.:|||.:|:..|:|||:
Human   360 STGLRSLGATLKHSYREVGILLLYLAVGVSVFSGVAYTAEKE-EDVGFNTIPACWWWGTVSMTTV 423

  Fly   372 GYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIR-- 434
            ||||:||.|:|||:....|.|.|:||:|||:.:|.:.||..|.          ::||..|.:|  
Human   424 GYGDVVPVTVAGKLAASGCILGGILVVALPITIIFNKFSHFYR----------RQKALEAAVRNS 478

  Fly   435 -------IAKASSGAAFVSKKKAAEARWAAQESGIE 463
                   :..:..|.:..|.:.:.|.....|.:.:|
Human   479 NHQEFEDLLSSIDGVSEASLETSRETSQEGQSADLE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 39/125 (31%)
Ion_trans 188..415 CDD:395416 86/243 (35%)
DUF3399 445..540 CDD:403174 4/19 (21%)
KCNS1XP_016883335.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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