DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and KCNK2

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001017425.2 Gene:KCNK2 / 3776 HGNCID:6277 Length:426 Species:Homo sapiens


Alignment Length:256 Identity:54/256 - (21%)
Similarity:86/256 - (33%) Gaps:98/256 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 VVAIMPYYIGLGITDND----DVSGAF-------VTLRVFRVF------RIFKFSRHSQGLRILG 314
            |.||....|.||.|.|.    |:..:|       .|:....:.      :||.......|:.:.|
Human   122 VAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPLFG 186

  Fly   315 YTLKSCASELG-------------FLVFSLA---------MAIIIFATVMFYA-----EKNVNGT 352
            :.|.....:||             |:.::::         :..|:|..|:|.|     .|::.| 
Human   187 FLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAIIFKHIEG- 250

  Fly   353 NFTSIPAAFWYTIVTMTTLGYGDMVPETIAGK----------------IVGGVCSLSGVL----- 396
              .|...|.::.::|:||:|:||.|    ||.                |:.|:...:.||     
Human   251 --WSALDAIYFVVITLTTIGFGDYV----AGGSDIEYLDFYKPVVWFWILVGLAYFAAVLSMIGD 309

  Fly   397 ---VIALPVPVIVSNFS-----------------------RIYHQNQRADKRKAQRKARLA 431
               ||:......|..|.                       .||.:.|||...|.:..|.||
Human   310 WLRVISKKTKEEVGEFRAHAAEWTANVTAEFKETRRRLSVEIYDKFQRATSIKRKLSAELA 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727
Ion_trans 188..415 CDD:459842 47/238 (20%)
DUF3399 471..535 CDD:463381
KCNK2NP_001017425.2 Important for GNG4 binding and L-glutamate release in astrocytes. /evidence=ECO:0000250|UniProtKB:Q920B6 17..38
Important for GNG4 binding and L-glutamate release in astrocytes. /evidence=ECO:0000250|UniProtKB:Q920B6 51..61
Ion_trans_2 <138..196 CDD:462301 8/57 (14%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:Q920B6 157..162 1/4 (25%)
Ion_trans_2 234..312 CDD:462301 20/84 (24%)
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:Q920B6 266..271 2/4 (50%)
Interaction with AKAP5. /evidence=ECO:0000250|UniProtKB:P97438 313..326 3/12 (25%)
Essential for chloroform and halothane sensitivity. /evidence=ECO:0000250|UniProtKB:P97438 337..385 9/34 (26%)
Blue background indicates that the domain is not in the aligned region.

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