DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and KCNG1

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_002228.2 Gene:KCNG1 / 3755 HGNCID:6248 Length:513 Species:Homo sapiens


Alignment Length:440 Identity:148/440 - (33%)
Similarity:227/440 - (51%) Gaps:56/440 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTLLG-----SNEREFF-----YDEDCKEYFFD 86
            |:|||:    :::|||.|.::.....||:::|.|.||     :|..:..     ||..|.|:|||
Human    58 PEDRRR----RIIINVGGIKYSLPWTTLDEFPLTRLGQLKACTNFDDILNVCDDYDVTCNEFFFD 118

  Fly    87 RDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERL--- 148
            |:|..|..||.:.|.|||...:..|..|:.|||.::||..|.:..||...|..:..|.||.:   
Human   119 RNPGAFGTILTFLRAGKLRLLREMCALSFQEELLYWGIAEDHLDGCCKRRYLQKIEEFAEMVERE 183

  Fly   149 -MDDKL------SENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVET 206
             .||.|      ||...:...:|....:::....|.||:.....||..::..|:.|:.:...|.|
Human   184 EEDDALDSEGRDSEGPAEGEGRLGRCMRRLRDMVERPHSGLPGKVFACLSVLFVTVTAVNLSVST 248

  Fly   207 VPC-------GHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSI 264
            :|.       ||         |.:....||. :::.||..|:.|:||||..||.:..|:||.:::
Human   249 LPSLREEEEQGH---------CSQMCHNVFI-VESVCVGWFSLEFLLRLIQAPSKFAFLRSPLTL 303

  Fly   265 IDVVAIMPYYI--------------GLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGY 315
            ||:|||:||||              |.|.:..|.|......||..|:..:.:.:|||.||:.||.
Human   304 IDLVAILPYYITLLVDGAAAGRRKPGAGNSYLDKVGLVLRVLRALRILYVMRLARHSLGLQTLGL 368

  Fly   316 TLKSCASELGFLVFSLAMAIIIFATVMFYAEKNV-NGTNFTSIPAAFWYTIVTMTTLGYGDMVPE 379
            |.:.|..|.|.|:..|.:||.:||.:::..|..: :...||||||.:|:.::||||:|||||||.
Human   369 TARRCTREFGLLLLFLCVAIALFAPLLYVIENEMADSPEFTSIPACYWWAVITMTTVGYGDMVPR 433

  Fly   380 TIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKAR 429
            :..|::|.....|||:|::|.||..|...|||.|.:.::..:|...|:|:
Human   434 STPGQVVALSSILSGILLMAFPVTSIFHTFSRSYLELKQEQERVMFRRAQ 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 42/121 (35%)
Ion_trans 188..415 CDD:395416 89/248 (36%)
DUF3399 445..540 CDD:403174
KCNG1NP_002228.2 BTB_POZ_KCNG1_2 60..173 CDD:349728 41/116 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..204 5/19 (26%)
Ion_trans 227..471 CDD:395416 91/253 (36%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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