DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shal and KCND1

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_024308146.1 Gene:KCND1 / 3750 HGNCID:6237 Length:675 Species:Homo sapiens


Alignment Length:581 Identity:371/581 - (63%)
Similarity:439/581 - (75%) Gaps:59/581 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASVAAWLPFARAAAIGWVPIATHPLPPPPMPKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTL 66
            |.:|.|||||||||:||:|:|..||||.|..|..|  .||.|::||||||||||:|||::|||||
Human     3 AGLATWLPFARAAAVGWLPLAQQPLPPAPGVKASR--GDEVLVVNVSGRRFETWKNTLDRYPDTL 65

  Fly    67 LGSNEREFFYDEDCKEYFFDRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGD 131
            |||:|:|||||.|..|||||||||:|||:||:||||:||.|:.||:.::||||||:|::|:::||
Human    66 LGSSEKEFFYDADSGEYFFDRDPDMFRHVLNFYRTGRLHCPRQECIQAFDEELAFYGLVPELVGD 130

  Fly   132 CCYEDYRDRKRENAERLMDDKLSEN-GD-QNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFF 194
            ||.|:|||||:||||||.:|:.:|. || ..|...:::||::|||||||||||:|||||||||||
Human   131 CCLEEYRDRKKENAERLAEDEEAEQAGDGPALPAGSSLRQRLWRAFENPHTSTAALVFYYVTGFF 195

  Fly   195 IAVSVMANVVETVPC-GHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFV 258
            |||||:||||||:|| |.....:...|||||:...|||:|||||:|||.||||||||||.||:|:
Human   196 IAVSVIANVVETIPCRGSARRSSREQPCGERFPQAFFCMDTACVLIFTGEYLLRLFAAPSRCRFL 260

  Fly   259 RSVMSIIDVVAIMPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASE 323
            |||||:||||||:||||||.:..||||||||||||||||||||||||||||||||||||||||||
Human   261 RSVMSLIDVVAILPYYIGLLVPKNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASE 325

  Fly   324 LGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGG 388
            ||||:|||.|||||||||||||||..|.|||||||||||||||||||||||||||.||||||.|.
Human   326 LGFLLFSLTMAIIIFATVMFYAEKGTNKTNFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGS 390

  Fly   389 VCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGAAFVSKKKAAEA 453
            :|||||||||||||||||||||||||||||||||:||:|.||||||:||:.:..||:..|     
Human   391 ICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQQKVRLARIRLAKSGTTNAFLQYK----- 450

  Fly   454 RWAAQESGIE--------------------------LDDN---------YRDEDIFELQHHHLLR 483
                |..|:|                          |.|:         .|:...||.||||||.
Human   451 ----QNGGLEVGRGLDRVGVSHNGEEGAALIALLHLLQDSGSGEEQALCVRNRSAFEQQHHHLLH 511

  Fly   484 CLEKTTDREFVELEIPFNGQPKRPGSPSPMASPAHSTNSAA------GLLQSCCGRCCSQR 538
            ||||||..||.: |:.|:   :..|:.||....:.||:.::      .||.|||.|...:|
Human   512 CLEKTTCHEFTD-ELTFS---EALGAVSPGGRTSRSTSVSSQPVGPGSLLSSCCPRRAKRR 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 92/137 (67%)
Ion_trans 188..415 CDD:395416 190/227 (84%)
DUF3399 445..540 CDD:403174 37/135 (27%)
KCND1XP_024308146.1 Shal-type 3..28 CDD:288455 16/24 (67%)
BTB_2 42..131 CDD:308049 61/88 (69%)
Ion_trans 185..417 CDD:306908 194/231 (84%)
DUF3399 447..578 CDD:314709 37/135 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11585
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 757 1.000 Inparanoid score I557
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48930
OrthoDB 1 1.010 - - D221939at33208
OrthoFinder 1 1.000 - - FOG0001867
OrthoInspector 1 1.000 - - otm41431
orthoMCL 1 0.900 - - OOG6_103639
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.840

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