DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and KCNC1

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001106212.1 Gene:KCNC1 / 3746 HGNCID:6233 Length:585 Species:Homo sapiens


Alignment Length:598 Identity:185/598 - (30%)
Similarity:288/598 - (48%) Gaps:114/598 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 DDEKLLINVSGRRFETWRNTLEKYPDTLLG-----SNEREFFYDEDCKEYFFDRDPDIFRHILNY 98
            :.|:::|||.|.|.:|:|:||...|.|.|.     .....|.||....|:||||.|.:|.|||||
Human     6 ESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVFAHILNY 70

  Fly    99 YRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMD------------- 150
            |||||||.|...|...|:|||||:||....:..||:..||..:  :||..:|             
Human    71 YRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHR--DAEEALDSFGGAPLDNSADD 133

  Fly   151 ---DKLSENGD-QNLQQLT------------------NMRQKMWRAFENPHTSTSALVFYYVTGF 193
               |...::|| ::..::|                  ..:.::|..||:|::|..|....:.:.|
Human   134 ADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASLF 198

  Fly   194 FIAVSVMANVVET----VPCGHRPG----RAGTLPCGERY------KIVFFCLDTACVMIFTAEY 244
            ||.||:....:||    .|..::..    |.||   ..||      :.....::..||:.||.|:
Human   199 FILVSITTFCLETHERFNPIVNKTEIENVRNGT---QVRYYREAETEAFLTYIEGVCVVWFTFEF 260

  Fly   245 LLRLFAAPDRCKFVRSVMSIIDVVAIMPYYIGLGITD-----NDDVSGAFVTLRVFRVFRIFKFS 304
            |:|:...|::.:|:::.::|||.|||:|:|:.:|::.     ..||.|....:|..|:.||||.:
Human   261 LMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLT 325

  Fly   305 RHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEK---------NVNGTNFTSIPAA 360
            ||..|||:||:||::..:|...|:..||:.::||||:::|||:         ....|:|.:||..
Human   326 RHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIG 390

  Fly   361 FWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQ 425
            ||:.:|||||||||||.|:|.:|.:||.:|:|:|||.||:||||||:||...|.......|...:
Human   391 FWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKK 455

  Fly   426 RKARLARIRIAKASSGAAFVSKKKAAEARWAAQESGIELDDNYRDEDIFELQH------------ 478
            :|..:.|    ....|:....|........:.|.....|    ..|:|.|:..            
Human   456 KKKHIPR----PPQLGSPNYCKSVVNSPHHSTQSDTCPL----AQEEILEINRADSKLNGEVAKA 512

  Fly   479 -------HHLLRCLEKTTDREFVELEIPF--NGQPKRPGSPSPMASPAHSTNSAAGLLQSCCGRC 534
                   .|:.:.|  |.|.     .:||  :|..:|.|....:::..::.....|:.:..|   
Human   513 ALANEDCPHIDQAL--TPDE-----GLPFTRSGTRERYGPCFLLSTGEYACPPGGGMRKDLC--- 567

  Fly   535 CSQRYQACGKYMP 547
              :......||||
Human   568 --KESPVIAKYMP 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 49/109 (45%)
Ion_trans 188..415 CDD:459842 98/254 (39%)
DUF3399 471..535 CDD:463381 14/84 (17%)
KCNC1NP_001106212.1 BTB_KCNC1_3 6..122 CDD:349721 52/117 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..147 3/25 (12%)
Ion_trans 189..447 CDD:459842 99/260 (38%)
Selectivity filter. /evidence=ECO:0000250 400..405 4/4 (100%)

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