DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and KCNA3

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_002223.3 Gene:KCNA3 / 3738 HGNCID:6221 Length:575 Species:Homo sapiens


Alignment Length:456 Identity:166/456 - (36%)
Similarity:251/456 - (55%) Gaps:65/456 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PLPPPPMPKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTLLGSNEREF-FYDEDCKEYFFDRD 88
            ||||.......:....|:::||:||.||||...||.::|:||||..:|.. ::|....||||||:
Human    88 PLPPSLPAAGEQDCCGERVVINISGLRFETQLKTLCQFPETLLGDPKRRMRYFDPLRNEYFFDRN 152

  Fly    89 PDIFRHILNYYRT-GKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDK 152
            ...|..||.||:: |::..|.:..:..:.||:.|:     .:|:...|.:|:          |:.
Human   153 RPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFY-----QLGEEAMEKFRE----------DEG 202

  Fly   153 LSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVPCGHRPGR-- 215
            .....::.|.:....|| :|..||.|.:|..|.....|:...|.:|::...:||:| ..|..:  
Human   203 FLREEERPLPRRDFQRQ-VWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLP-EFRDEKDY 265

  Fly   216 -----------AGTLPCGER-----YKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSI 264
                       ||....|.|     :...||.::|.|::.|:.|.|:|.||.|.:..|.|::|::
Human   266 PASTSQDSFEAAGNSTSGSRAGASSFSDPFFVVETLCIIWFSFELLVRFFACPSKATFSRNIMNL 330

  Fly   265 IDVVAIMPYYIGLGI-----TDNDDVSGAFVTLRVF---RVFRIFKFSRHSQGLRILGYTLKSCA 321
            ||:|||:||:|.||.     ..|...:.:...|||.   |||||||.||||:||:|||.|||:..
Human   331 IDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASM 395

  Fly   322 SELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIV 386
            .|||.|:|.|.:.:|:|::.:::||.:...:.|:|||.|||:.:|||||:|||||.|.||.||||
Human   396 RELGLLIFFLFIGVILFSSAVYFAEADDPTSGFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIV 460

  Fly   387 GGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADK--------------------RKAQRKARLA 431
            |.:|:::|||.||||||||||||:..||:....::                    |||:..:.|:
Human   461 GSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQSQYMHVGSCQHLSSSAEELRKARSNSTLS 525

  Fly   432 R 432
            :
Human   526 K 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 41/120 (34%)
Ion_trans 188..415 CDD:459842 110/252 (44%)
DUF3399 471..535 CDD:463381
KCNA3NP_002223.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
BTB_POZ 104..230 CDD:453885 45/141 (32%)
Ion_trans 233..490 CDD:459842 112/257 (44%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 444..449 3/4 (75%)
Interaction with KCNE4. /evidence=ECO:0000250|UniProtKB:P15384 482..575 8/45 (18%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P15384 573..575
Blue background indicates that the domain is not in the aligned region.

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