DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and CG1688

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster


Alignment Length:317 Identity:60/317 - (18%)
Similarity:98/317 - (30%) Gaps:120/317 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 SIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVI--------ALPVPVIVSNFSRI 412
            |...|..|::..:||:|:|.:.|.|.|||:.....:|.||.::        ||....:...:.|:
  Fly   192 SFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRL 256

  Fly   413 YHQNQR---------------------------ADKRKAQRKARLARIRIAKASS---------- 440
            ..|.||                           .|||..:|.|.....:...|:|          
  Fly   257 CCQLQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRSKRRMANCKGCQYDAANSETSLNDCLEY 321

  Fly   441 ---GAAFVSKKK-------------------------------------AAEARWAAQESGIELD 465
               |.....||:                                     :|..::|.|:..::..
  Fly   322 GQKGKLPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPDVMLMTTTSGSALLKYAPQQQQLQQQ 386

  Fly   466 DNYRDEDIFELQHHHL-LRCLEKTTDREFV-----------------------ELEIPFNGQPKR 506
            .......: ..|||.: |:..::...:.||                       .:..||...|..
  Fly   387 QQLSTATL-PRQHHQMQLQQQQQQLQQNFVAVPSSMLRMPLTVPPNCYAPATATIYFPFGHAPSA 450

  Fly   507 PGSPSPMASPAHSTNSAAG--LLQSCCGRCCSQRYQ------ACGKYMPAASNAQNS 555
            ||||:  .:.||.|.:..|  |..:..|.....:|.      |.||:...||..|::
  Fly   451 PGSPA--HNQAHPTQNPNGNALGNTTLGSQPLVKYHTIHLQPASGKHRVLASGLQDA 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727
Ion_trans 188..415 CDD:459842 18/66 (27%)
DUF3399 471..535 CDD:463381 19/89 (21%)
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 17/54 (31%)
Ion_trans_2 822..896 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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