DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Sh

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster


Alignment Length:445 Identity:161/445 - (36%)
Similarity:242/445 - (54%) Gaps:84/445 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PMPKDRRKTDD--EKLLINVSGRRFETWRNTLEKYPDTLLGSNEREF-FYDEDCKEYFFDRDPDI 91
            |:|.|.    |  |:::|||||.||||...||.::||||||...|.. ::|....||||||....
  Fly    88 PIPHDH----DFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPS 148

  Fly    92 FRHILNYYRT-GKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRK---RENAERLMDDK 152
            |..||.||:: |:|..|.:..|..:.||:.|:     .:||.....:|:.:   :|....|.|::
  Fly   149 FDAILYYYQSGGRLRRPVNVPLDVFSEEIKFY-----ELGDQAINKFREDEGFIKEEERPLPDNE 208

  Fly   153 LSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAG 217
                          .::|:|..||.|.:|.:|.|...::.|.|.:|::...:|            
  Fly   209 --------------KQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLE------------ 247

  Fly   218 TLPCGERYKIV--------------------FFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVM 262
            |||..:.||:.                    ||.::|.|::.||.|..:|..|.|::..|.|.||
  Fly   248 TLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVM 312

  Fly   263 SIIDVVAIMPYYIGLG----------------ITDNDDVSGAFVTL------RVFRVFRIFKFSR 305
            ::||::||:||:|.|.                ::..|..|...::|      |:.|||||||.||
  Fly   313 NVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSR 377

  Fly   306 HSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTT 370
            ||:||:|||.|||:...|||.|:|.|.:.:::|::.:::||.....:.|.|||.|||:.:|||||
  Fly   378 HSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTT 442

  Fly   371 LGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQ 425
            :|||||.|..:.|||||.:|:::|||.||||||||||||:..||:....::.::|
  Fly   443 VGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQ 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 45/120 (38%)
Ion_trans 188..415 CDD:459842 103/268 (38%)
DUF3399 471..535 CDD:463381
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 49/144 (34%)
Ion_trans 226..488 CDD:459842 106/273 (39%)
Blue background indicates that the domain is not in the aligned region.

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