DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcnv2

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001099840.1 Gene:Kcnv2 / 294065 RGDID:1309271 Length:561 Species:Rattus norvegicus


Alignment Length:478 Identity:147/478 - (30%)
Similarity:228/478 - (47%) Gaps:79/478 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PPMPKDRR---KTDDEKLLINVSGRRFETWRNTLEKYPDTLLG----SNEREF------FYDEDC 80
            ||.|.|..   .|....|.:||.|..::.....|..||.|.||    |..|..      .|:...
  Rat    89 PPAPLDGHTDTPTQLSTLKVNVGGHSYQLECCELANYPKTRLGRLVTSTSRNCQLGLCDDYEAKT 153

  Fly    81 KEYFFDRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDC---CYEDYRDR-- 140
            .||||||||.:|:.|.|:|.:|.|......|..|:.|||.::|:.......|   |:|:.||.  
  Rat   154 DEYFFDRDPAVFQLIYNFYTSGVLLVRDELCPRSFLEELGYWGVRLKYTPRCCRICFEERRDELS 218

  Fly   141 -------------KRENAERLMDDKLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTG 192
                         :.|.||.|..| :...|.|        ||::|...|.|.:|.:|......:.
  Rat   219 EQLKIQRELRAQAQAEEAEELFRD-MRFYGPQ--------RQRLWNLMEKPFSSVAAKAMGVASN 274

  Fly   193 FFIAVSVMA---NVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDR 254
            .|:.:||:|   |.||.:......|..|..|     :.:...::..||..||.|:||||.:.|:.
  Rat   275 LFVLISVVALALNTVEEMQHQAEQGTGGGDP-----RPILEHVEMLCVAFFTLEFLLRLASTPNL 334

  Fly   255 CKFVRSVMSIIDVVAIMPYYIGLGI---TDNDD--------------------VSGAFVTLRVFR 296
            .:|.||.::::|:|||:|:|:.|.:   |..|.                    |......:|:.|
  Rat   335 RRFARSALNLVDLVAILPFYLQLLLECFTSEDQRHGKGSPREHDLETVGRVGKVGQVLRIMRLMR 399

  Fly   297 VFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAF 361
            :|||.|.:|||.|||..|:||:.|..::|.|:..:.|.|..|:..::..|.:|.|||||||..|:
  Rat   400 IFRILKLARHSTGLRAFGFTLRQCYQQVGCLMLFITMGIFSFSAAVYSVEHDVPGTNFTSILHAW 464

  Fly   362 WYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQR 426
            |:..|:::|:|||||.|||..|::...:|...|:::..:|:.::.:.||. |:...:|.:..|.|
  Rat   465 WWAAVSISTVGYGDMYPETHLGRLFAFLCIAFGIILNGMPISILYNKFSD-YYSKLKAYEYTAIR 528

  Fly   427 KAR-------LARIRIAKASSGA 442
            :.|       .|..::|:..||:
  Rat   529 RERGKVNFMQRATKKMAECLSGS 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 43/145 (30%)
Ion_trans 188..415 CDD:459842 82/252 (33%)
DUF3399 471..535 CDD:463381
Kcnv2NP_001099840.1 BTB_POZ 106..213 CDD:453885 36/106 (34%)
Ion_trans 275..520 CDD:459842 82/250 (33%)
Blue background indicates that the domain is not in the aligned region.

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