DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcna10

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001074609.1 Gene:Kcna10 / 242151 MGIID:3037820 Length:511 Species:Mus musculus


Alignment Length:424 Identity:148/424 - (34%)
Similarity:246/424 - (58%) Gaps:51/424 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PPPPMPKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTLLGSNEREF-FYDEDCKEYFFDRDPD 90
            ||.|.|....: .:::::||::|.||||...||.::|:||||..|:.. |:|....||||||:..
Mouse    73 PPGPEPVVLNE-GNQRVIINIAGLRFETQLRTLNQFPETLLGDREKRMQFFDSMRNEYFFDRNRP 136

  Fly    91 IFRHILNYYRT-GKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDKLS 154
            .|..||.||:: ||:..|.:..:..:.:|::|:.:..:.:         |:.||:...:.|    
Mouse   137 SFDGILYYYQSGGKIRRPANVPIDVFADEISFYELGSEAM---------DQFREDEGFIKD---- 188

  Fly   155 ENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVP----------- 208
               .:.|....:..::.|..||.|.:|::|.....|:...:.:|:....:||:|           
Mouse   189 ---PETLLPTNDFHRQFWLLFEYPESSSAARGVAVVSVLVVVISITIFCLETLPEFREDRELKVV 250

  Fly   209 -----CGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVV 268
                 ..::.|.:.|:     :...||.:::.|::.||.|.:||....|.:..|.:::|:|||::
Mouse   251 RDPSINTNKTGLSQTM-----FTDPFFMVESTCIVWFTFELVLRFVVCPSKTDFFKNIMNIIDII 310

  Fly   269 AIMPYYIGLGITD---------NDDVSGAFV-TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASE 323
            :|:||:..| ||:         ..::|.|.: .:|:.|||||||.||||:||:|||.|||:...|
Mouse   311 SIIPYFATL-ITELVQETEPSAQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRE 374

  Fly   324 LGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGG 388
            ||.|:|.|.:.:|:|::.:::||.:...::|:|||..||:.:|||||:|||||.|.|..|||||.
Mouse   375 LGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGT 439

  Fly   389 VCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKR 422
            :|:::|||.||||||||||||:..||:....:::
Mouse   440 LCAIAGVLTIALPVPVIVSNFNYFYHRETENEEK 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 39/118 (33%)
Ion_trans 188..415 CDD:395416 99/252 (39%)
DUF3399 445..540 CDD:403174
Kcna10NP_001074609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..44
BTB_2 88..179 CDD:280393 34/99 (34%)
BTB 88..171 CDD:197585 33/82 (40%)
Ion_trans 267..467 CDD:278921 93/200 (47%)
Ion_trans_2 382..458 CDD:285168 40/75 (53%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 421..426 3/4 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..511
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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