DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shal and Kcng1

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001074603.1 Gene:Kcng1 / 241794 MGIID:3616086 Length:514 Species:Mus musculus


Alignment Length:469 Identity:151/469 - (32%)
Similarity:238/469 - (50%) Gaps:63/469 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DRRKTDDEKLLINVSGRRFETWRNTLEKYPDTLLG-----SNEREFF-----YDEDCKEYFFDRD 88
            |||:    :::|||.|.::.....||:::|.|.||     :|..:..     ||..|.|:||||:
Mouse    60 DRRR----QIIINVGGIKYSLPWTTLDEFPLTRLGQLKACTNFDDILSVCDDYDVTCNEFFFDRN 120

  Fly    89 PDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDR--------KRENA 145
            |..|..||.:.|.|||...:..|..|:.|||.::||..|.:..||...|..:        :||..
Mouse   121 PGAFGTILTFLRAGKLRLLREMCALSFQEELLYWGIAEDHLDGCCKRRYLQKIEEFAEMMEREEE 185

  Fly   146 ERLMD--DKLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVP 208
            |..:|  |:.||....:..:|:...:::....|.||:.....||..::..|:.|:.:...|.|:|
Mouse   186 EEPLDSEDQESEGPSASEGRLSRCMRRLRDMVERPHSGLPGKVFACLSVLFVTVTAVNLSVSTLP 250

  Fly   209 CGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPY 273
            ........|  .|.:....||. :::.||..|:.|:|||...||.:..|:||.:::||:|||:||
Mouse   251 SLREEEEQG--QCSQMCHNVFI-VESVCVGWFSLEFLLRFIQAPSKFAFLRSPLTLIDLVAILPY 312

  Fly   274 YIGLGI-----------TDNDDVSGAFVTLRVFRVFRI---FKFSRHSQGLRILGYTLKSCASEL 324
            |:.|.:           |.|..:....:.|||.|..||   .:.:|||.||:.||.|.:.|..|.
Mouse   313 YVTLLVDGAASSRRKPSTGNSYLDKVGLVLRVLRALRILYVMRLARHSLGLQTLGLTARRCTREF 377

  Fly   325 GFLVFSLAMAIIIFATVMFYAEKNV-NGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGG 388
            |.|:..|.:||.:||.:::..|..: :...||||||.:|:.::||||:|||||||.:..|::|..
Mouse   378 GLLLLFLCVAIALFAPLLYVIENEMADSPEFTSIPACYWWAVITMTTVGYGDMVPRSTPGQVVAL 442

  Fly   389 VCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGAAFVSKKKAAEA 453
            ...|||:|::|.||..|...|||.|.:.::..:|...|:|:              ::.|.|    
Mouse   443 SSILSGILLMAFPVTSIFHTFSRSYLELKQEQERVLIRRAQ--------------YLIKTK---- 489

  Fly   454 RWAAQESGIELDDN 467
               :|.||:..|.:
Mouse   490 ---SQLSGMSQDSD 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 42/127 (33%)
Ion_trans 188..415 CDD:395416 88/241 (37%)
DUF3399 445..540 CDD:403174 6/23 (26%)
Kcng1NP_001074603.1 BTB_POZ_KCNG1_2 60..173 CDD:349728 41/116 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..205 7/24 (29%)
Ion_trans 227..471 CDD:395416 90/246 (37%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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