DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcng2

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001177302.1 Gene:Kcng2 / 240444 MGIID:3694646 Length:480 Species:Mus musculus


Alignment Length:452 Identity:143/452 - (31%)
Similarity:224/452 - (49%) Gaps:61/452 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 HPLPPPPMP-------KDRRKTDDEKLLINVSGRRFETWRNTLEKYP-------------DTLLG 68
            ||..|...|       :..|......::|||.|.|.......|.:.|             |.||.
Mouse     7 HPEAPDAEPGSAGRRGRGGRGARARHVIINVGGCRVRLAWAALARCPLARLERLRACRGHDELLR 71

  Fly    69 SNEREFFYDEDCKEYFFDRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCC 133
            ..:.   ||....|:||||.|..||.|:...|.|||...:..|..::.:|||::||....:..||
Mouse    72 VCDD---YDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCC 133

  Fly   134 YEDYRDRKRENAE---------------RLMDDKLSENGDQNLQQLTNMRQKMWRAFENPHTSTS 183
            ....|.|:.|.||               |.:.....|.|.|.|:.:.          ||||:..:
Mouse   134 LRRLRRREEEAAEASAAQPARGPPTSPGRALGSGRLERGRQRLRDVV----------ENPHSGLA 188

  Fly   184 ALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRL 248
            ..:|.||:..|:||:.:...:.|:|........|  .|..:.:.: |.|:|.||..|:.|:|||.
Mouse   189 GRLFAYVSVAFVAVTAVGLCLSTMPDVRAEEERG--ECSTKCRNL-FVLETVCVAWFSFEFLLRS 250

  Fly   249 FAAPDRCKFVRSVMSIIDVVAIMPYYIGL------GITDNDDVSGAFVTLRVFRVFR---IFKFS 304
            ..|..:|.|:|:.::|||::||:|:|:.|      |.|.:..:..|.:.||:.|..|   :.:.:
Mouse   251 LQAESKCAFLRTPLAIIDILAILPFYVSLLAGLAAGPTGSKMLERAGLVLRLLRALRVLYVMRLA 315

  Fly   305 RHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVNG-TNFTSIPAAFWYTIVTM 368
            |||.|||.||.|::.||.|.|.|:..|.:|:.:||.::..||:.:.. .:|:|:||::|:.:::|
Mouse   316 RHSLGLRSLGLTVRRCAREFGLLLLFLCVAMALFAPLVHLAERELGAHRDFSSVPASYWWAVISM 380

  Fly   369 TTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARL 430
            ||:|||||||.::.|::|.....|||:|::|.||..|...|||.|.:.:...:|.|..:..|
Mouse   381 TTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVTSIFHTFSRSYSELKEQQQRAASPEPAL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 40/139 (29%)
Ion_trans 188..415 CDD:395416 87/236 (37%)
DUF3399 445..540 CDD:403174
Kcng2NP_001177302.1 BTB_POZ 33..127 CDD:365784 31/96 (32%)
Ion_trans 190..429 CDD:395416 88/241 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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