DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcng3

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_705732.1 Gene:Kcng3 / 225030 MGIID:2663923 Length:433 Species:Mus musculus


Alignment Length:459 Identity:144/459 - (31%)
Similarity:228/459 - (49%) Gaps:91/459 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LLINVSGRRFETWRNTLEKYP----DTLLG-SNEREFF-----YDEDCKEYFFDRDPDIFRHILN 97
            :::||.|.|:...|..|:.:|    ..|.| .:||:..     ||.:..||||||..:.|..||.
Mouse    11 VVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAFGFILL 75

  Fly    98 YYR-TGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDKLSENGDQNL 161
            |.| .|||.:....|..|:..|:.::|:....:..||            :|.:||::|:....:.
Mouse    76 YVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCC------------QRRLDDRMSDTHTFHA 128

  Fly   162 QQLTNMRQ----------------KMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVP-- 208
            .......|                :|.|.||.|.:|.:|.:...|:..|:.||::.....|:|  
Mouse   129 ADELGREQPRPAGPEAAPSRRWLERMRRTFEEPTSSLAAQILASVSVVFVIVSMVVLCASTLPDW 193

  Fly   209 ----CGHR-----------PGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFV 258
                ..:|           |||.   |.|        .::..|:..||||.::|...:.::|:||
Mouse   194 RAAVADNRSLDDRSRYSASPGRE---PSG--------IIEAICIGWFTAECIVRFIVSKNKCEFV 247

  Fly   259 RSVMSIIDVVAIMPYYIGLGIT----DNDDVSGAFVTLRVFRVFRIF---KFSRHSQGLRILGYT 316
            :..::|||::||.||||.:.:|    :|..:..|.|||||.|:.|||   |.:||..||:.||.|
Mouse   248 KRPLNIIDLLAITPYYISVLMTVFTGENSQLQRAGVTLRVLRMMRIFWVIKLARHFIGLQTLGLT 312

  Fly   317 LKSCASELGFLVFSLAMAIIIFATVMFYAEKNV----NGTNFTSIPAAFWYTIVTMTTLGYGDMV 377
            ||.|..|:..|:..:.:|:.||:.:....|..:    :..:|.|||||.|:.|::|||:|||||.
Mouse   313 LKRCYREMAMLLVFICVAMAIFSALSQLLEHGLDLETSNKDFASIPAACWWVIISMTTVGYGDMY 377

  Fly   378 PETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGA 442
            |.|:.|:|:||||.:||::::|||:..|..:|.:.||:.:       .|.||.:|      |..|
Mouse   378 PITVPGRILGGVCVVSGIVLLALPITFIYHSFVQCYHELK-------FRSARYSR------SLSA 429

  Fly   443 AFVS 446
            .|::
Mouse   430 EFLN 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 33/111 (30%)
Ion_trans 188..415 CDD:459842 91/254 (36%)
DUF3399 471..535 CDD:463381
Kcng3NP_705732.1 BTB_POZ_KCNG3 11..122 CDD:349729 36/122 (30%)
Ion_trans 210..417 CDD:459842 85/217 (39%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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