DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and twk-40

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001255206.1 Gene:twk-40 / 189006 WormBaseID:WBGene00006691 Length:436 Species:Caenorhabditis elegans


Alignment Length:325 Identity:63/325 - (19%)
Similarity:121/325 - (37%) Gaps:78/325 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 EDYRDRKRENAERLMDDKLSENGDQNLQQLT-----NMRQKMWRAFE---------NPHTSTSAL 185
            |.:...||:..|.|.:.:.|..|...::.|.     |:.:.::.||:         .|.......
 Worm    92 ERFNIHKRQMIEHLWEMRESGIGQHVVEDLAVKYVDNVTRILFEAFDTHCIGAKHLRPGGEDEDY 156

  Fly   186 VFYYVTGFFIAVSVMANVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFA 250
            .:.|:|..|...:::..:          |.....|...|.|::       |::.......|.|..
 Worm   157 NWTYMTALFFTTTLLTTI----------GYGNLTPVTGRGKLL-------CILYALFGVPLILIT 204

  Fly   251 APDRCKFVRSVMSIIDVVAIMPYYIGLG----------ITDNDDVSGAFVTLRVFRVFRIFKFSR 305
            ..|..||:..     ::|.:..:|..|.          |:..||                    :
 Worm   205 VADIGKFLSE-----NIVQLYTWYRKLREKCSKQKYSVISSKDD--------------------K 244

  Fly   306 HSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTT 370
            :.:|...|.: |::..|...||:.::.::.|.|..|:.   ....|.:|.|   .|:::.:||||
 Worm   245 NKEGDLNLDH-LENYISIPIFLIVAILLSYITFGAVVL---SMWEGWDFFS---GFYFSFITMTT 302

  Fly   371 LGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRI 435
            :|:||:||......|:.....:.|:.:..:.:.::...:.|..|...||.|     .||.|.:.:
 Worm   303 VGFGDIVPLKREYYILDLCYIIIGLSITTMCIDLVGIQYIRKMHYFGRAIK-----DARFALVNV 362

  Fly   436  435
             Worm   363  362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 3/8 (38%)
Ion_trans 188..415 CDD:459842 44/236 (19%)
DUF3399 471..535 CDD:463381
twk-40NP_001255206.1 Ion_trans_2 <174..214 CDD:462301 10/56 (18%)
Ion_trans_2 269..343 CDD:462301 18/79 (23%)
Blue background indicates that the domain is not in the aligned region.

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