DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and shl-1

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_500975.2 Gene:shl-1 / 177400 WormBaseID:WBGene00022240 Length:578 Species:Caenorhabditis elegans


Alignment Length:536 Identity:385/536 - (71%)
Similarity:439/536 - (81%) Gaps:13/536 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASVAAWLPFARAAAIGWVPIATHPLPPPPM---PKDRR--KTDDEKLLINVSGRRFETWRNTLE 60
            |||||||||||||||||||||:..|:|..|:   .||..  ...||||.||:||||||||:||||
 Worm     1 MASVAAWLPFARAAAIGWVPISRQPMPQAPVAIQAKDLAVDHVSDEKLAINISGRRFETWKNTLE 65

  Fly    61 KYPDTLLGSNEREFFYDEDCKEYFFDRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIM 125
            |:|:|||||||:|||||||..|||||||||||||||.:|||||||||:||||.:|||||:|||||
 Worm    66 KFPETLLGSNEKEFFYDEDTGEYFFDRDPDIFRHILTFYRTGKLHYPRHECLVAYDEELSFFGIM 130

  Fly   126 PDVIGDCCYEDYRDRKRENAERLMDDKLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYV 190
            ||:|.|||||||:|:||||.|||.:::: ||.|.:..:| ::::|||.|||||||::.|||||||
 Worm   131 PDLISDCCYEDYKDKKRENQERLQEERV-ENADISTLKL-SLKEKMWAAFENPHTTSIALVFYYV 193

  Fly   191 TGFFIAVSVMANVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRC 255
            .|||||||||.|:|||:|||:....:.|  |||.|:..||.:|||||:|||.||.|||.:||||.
 Worm   194 IGFFIAVSVMCNIVETIPCGYEDNVSVT--CGEAYEEQFFVIDTACVIIFTIEYFLRLISAPDRI 256

  Fly   256 KFVRSVMSIIDVVAIMPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSC 320
            ||:||:||:|||:||||||:.|.:|||.||||.||||||||||||||||||||||||||||||||
 Worm   257 KFMRSIMSVIDVIAIMPYYVSLVLTDNKDVSGLFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSC 321

  Fly   321 ASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKI 385
            ||||||||||||||||||||:|:||||.|:.|.|||||:||||||||:||||||||||.||.|||
 Worm   322 ASELGFLVFSLAMAIIIFATIMYYAEKKVDATRFTSIPSAFWYTIVTLTTLGYGDMVPSTIMGKI 386

  Fly   386 VGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGAAFVSKKKA 450
            ||||||||||||||||||||||||||||||||||||||||:|||||||||.|.:||.|..:||:|
 Worm   387 VGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQKKARLARIRIVKNASGLALFNKKRA 451

  Fly   451 AEARWAAQESGIELDDNYRDEDIFELQHHHLLRCLEKTTDREFVELEIPFNGQPKRPGSPSPMAS 515
            .|||..|.|.|....|..|||||||:||||||:||||.|:|||||.|:.|.|....| .||..||
 Worm   452 HEARMLAFEQGHLSFDALRDEDIFEIQHHHLLQCLEKATEREFVESEVMFEGGRNTP-PPSETAS 515

  Fly   516 PAHSTNSAAGLLQSCC 531
            ....|.....|   ||
 Worm   516 LKGKTKRKRRL---CC 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 106/142 (75%)
Ion_trans 188..415 CDD:459842 181/226 (80%)
DUF3399 471..535 CDD:463381 33/61 (54%)
shl-1NP_500975.2 BTB_POZ 6..149 CDD:453885 106/142 (75%)
Ion_trans 187..416 CDD:459842 185/230 (80%)
DUF3399 472..>511 CDD:463381 25/39 (64%)

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