DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and shk-1

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_871935.1 Gene:shk-1 / 174536 WormBaseID:WBGene00014261 Length:536 Species:Caenorhabditis elegans


Alignment Length:432 Identity:154/432 - (35%)
Similarity:243/432 - (56%) Gaps:53/432 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MPKDRRKT-----------DDEKLLINVSGRRFETWRNTLEKYPDTLLGS-NEREFFYDEDCKEY 83
            :|..:|.|           .|:.:.|||||.||:|:.:||.:||::|||. |:|:.|:..|..|:
 Worm   112 LPSPQRGTPDTSSTQGHPYTDQIVTINVSGMRFQTFESTLSRYPNSLLGDRNKRQHFFVSDTNEF 176

  Fly    84 FFDRDPD------------IFRHILNYYRT-GKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYE 135
            ||||...            :|..||..|:: |::..|:...:..:.:|:.||     .:||...|
 Worm   177 FFDRHRTTSSSFTFEIRNYLFESILYIYQSGGRVKRPEIVPIDIFLKEMRFF-----QMGDDLLE 236

  Fly   136 DYRDRKRENAERLMDDKLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVM 200
            ::  ...|..|:..:..:..|..|         :|:|...|.|.:|.||.:..:::...||:|::
 Worm   237 EF--WIAEGYEKPKEVMMPNNKTQ---------RKIWELMEYPDSSLSARIIAFISIAVIALSII 290

  Fly   201 ANVVETVPCG--HRP-GRAGTL----PCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFV 258
            :...||||..  .:| ..:.|.    ...|::...||.::..|::.||.|.:||..:.|.:..|.
 Worm   291 SFCWETVPSDIEEKPINNSATAELLDEMDEKHYSPFFWIELMCILWFTIELILRFISCPCKVTFA 355

  Fly   259 RSVMSIIDVVAIMPYYIGLGITD----NDDVSGAFV-TLRVFRVFRIFKFSRHSQGLRILGYTLK 318
            .||::|||.|||.|:::.....|    |..:|.|.: .||:.||||:||.||||.||:|||.|.:
 Worm   356 TSVLNIIDFVAIAPFFVNFFFADTSKSNSSMSFAVLRVLRLVRVFRVFKLSRHSVGLQILGKTFR 420

  Fly   319 SCASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAG 383
            |...|...|:|.:|:|:::||:.|::||:....:.||||||:||:.:|||||:||||:||.:..|
 Worm   421 SSVQEFCLLIFFMAIALVLFASGMYFAEQGEPNSKFTSIPASFWFVLVTMTTVGYGDLVPLSPFG 485

  Fly   384 KIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQ 425
            |:|||:|::.|||.:|||||:||:||...|.|..|....|::
 Worm   486 KVVGGMCAMIGVLTLALPVPIIVANFKHFYRQENRLASMKSK 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 40/137 (29%)
Ion_trans 188..415 CDD:459842 100/238 (42%)
DUF3399 471..535 CDD:463381
shk-1NP_871935.1 BTB_POZ 133..229 CDD:453885 33/100 (33%)
Ion_trans 274..519 CDD:459842 102/244 (42%)
Blue background indicates that the domain is not in the aligned region.

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