DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and KCNG3

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_579875.1 Gene:KCNG3 / 170850 HGNCID:18306 Length:436 Species:Homo sapiens


Alignment Length:448 Identity:142/448 - (31%)
Similarity:224/448 - (50%) Gaps:88/448 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LLINVSGRRFETWRNTLEKYP----DTLLG-SNEREFF-----YDEDCKEYFFDRDPDIFRHILN 97
            :::||.|.|:...|..|:.:|    ..|.| .:||:..     ||.:..||||||..:.|..||.
Human    11 VVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAFGFILL 75

  Fly    98 YYR-TGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDKLSEN----- 156
            |.| .|||.:....|..|:..|:.::|:....:..||            :|.:||::|:.     
Human    76 YVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCC------------QRRLDDRMSDTYTFYS 128

  Fly   157 --------------GDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETV 207
                          |...........::|.|.||.|.:|.:|.:...|:..|:.||::.....|:
Human   129 ADEPGVLGRDEARPGGAEAAPSRRWLERMRRTFEEPTSSLAAQILASVSVVFVIVSMVVLCASTL 193

  Fly   208 P------CGHR-----------PGRAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRC 255
            |      ..:|           |||.   |.|        .::..|:..||||.::|...:.::|
Human   194 PDWRNAAADNRSLDDRSRYSAGPGRE---PSG--------IIEAICIGWFTAECIVRFIVSKNKC 247

  Fly   256 KFVRSVMSIIDVVAIMPYYIGLGIT----DNDDVSGAFVTLRVFRVFRIF---KFSRHSQGLRIL 313
            :||:..::|||::||.||||.:.:|    :|..:..|.|||||.|:.|||   |.:||..||:.|
Human   248 EFVKRPLNIIDLLAITPYYISVLMTVFTGENSQLQRAGVTLRVLRMMRIFWVIKLARHFIGLQTL 312

  Fly   314 GYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNV----NGTNFTSIPAAFWYTIVTMTTLGYG 374
            |.|||.|..|:..|:..:.:|:.||:.:....|..:    :..:|||||||.|:.|::|||:|||
Human   313 GLTLKRCYREMVMLLVFICVAMAIFSALSQLLEHGLDLETSNKDFTSIPAACWWVIISMTTVGYG 377

  Fly   375 DMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLAR 432
            ||.|.|:.|:|:||||.:||::::|||:..|..:|.:.||:.:       .|.||.:|
Human   378 DMYPITVPGRILGGVCVVSGIVLLALPITFIYHSFVQCYHELK-------FRSARYSR 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 33/111 (30%)
Ion_trans 188..415 CDD:395416 92/254 (36%)
DUF3399 445..540 CDD:403174
KCNG3NP_579875.1 BTB_POZ_KCNG3 11..122 CDD:349729 36/122 (30%)
Ion_trans 219..420 CDD:395416 83/211 (39%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 373..378 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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