DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcnk4

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_006526780.1 Gene:Kcnk4 / 16528 MGIID:1298234 Length:427 Species:Mus musculus


Alignment Length:229 Identity:44/229 - (19%)
Similarity:68/229 - (29%) Gaps:94/229 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 FLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGK------ 384
            ||:....:.::....|..|.|.       .|...|.::.|||:||:|:||.||....|:      
Mouse   205 FLLIGCLLFVLTPTFVFSYMES-------WSKLEAIYFVIVTLTTVGFGDYVPGDGTGQNSPAYQ 262

  Fly   385 ------IVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGAA 443
                  |:.|:...:.||       ..:.|:.|...:..||:                       
Mouse   263 PLVWFWILFGLAYFASVL-------TTIGNWLRAVSRRTRAE----------------------- 297

  Fly   444 FVSKKKAAEARWAAQESGIELDDNYRDEDIFELQHHHLLRCLEKTTDREFVELEIPFNGQP---- 504
             :....|..|.|....:.                         :.|.|.......|...||    
Mouse   298 -MGGLTAQAASWTGTVTA-------------------------RVTQRTGPSAPPPEKEQPLLPS 336

  Fly   505 ------------KRPGSPSP---MASPAHSTNSA 523
                        .|||||:|   :.:|:..|.||
Mouse   337 SLPAPPAVVEPAGRPGSPAPAEKVETPSPPTASA 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727
Ion_trans 188..415 CDD:459842 24/100 (24%)
DUF3399 471..535 CDD:463381 15/72 (21%)
Kcnk4XP_006526780.1 Ion_trans_2 <135..172 CDD:462301
Ion_trans_2 210..288 CDD:462301 21/91 (23%)
PLN02983 <322..>374 CDD:215533 13/49 (27%)
Blue background indicates that the domain is not in the aligned region.

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