DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcna7

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_034726.2 Gene:Kcna7 / 16495 MGIID:96664 Length:489 Species:Mus musculus


Alignment Length:446 Identity:171/446 - (38%)
Similarity:249/446 - (55%) Gaps:61/446 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PFARAAAIGWVPIATHPLPPPPMPKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTLLGSN-ER 72
            |.|||..      |..|..|||.      ...|:|::||:|.||||...||.::||||||.. .|
Mouse    25 PVARAVR------AMEPRCPPPC------GCCERLVLNVAGLRFETRARTLGRFPDTLLGDPVRR 77

  Fly    73 EFFYDEDCKEYFFDRDPDIFRHILNYYRT-GKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYED 136
            ..|||...:||||||....|..:|.||:: |:|..|.|..|..:.||::|:|:....:.      
Mouse    78 SRFYDGARREYFFDRHRPSFDAVLYYYQSGGRLRRPAHVPLDVFLEEVSFYGLGAAALA------ 136

  Fly   137 YRDRKRENAERLMDDKLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMA 201
               |.||      |:..:...::.|.:....|| :|..||.|.:|.:|.|...|:...|.||::.
Mouse   137 ---RLRE------DEGCAVPPERPLPRRAFARQ-LWLLFEFPESSQAARVLAVVSVLVILVSIVV 191

  Fly   202 NVVETVP--------CGHRPGRAGT---------------LPCGERYKIVFFCLDTACVMIFTAE 243
            ..:||:|        .|..|..|.|               .|..:.:...||.::|.|:..|:.|
Mouse   192 FCLETLPDFRDDRDDPGLAPVAAATGPFLARLNGSSPMPGAPPRQPFNDPFFVVETLCICWFSFE 256

  Fly   244 YLLRLFAAPDRCKFVRSVMSIIDVVAIMPYYIGLGI-------TDNDDVSGAFV-TLRVFRVFRI 300
            .|:||.|.|.:..|.::||::||.|||:||::.||.       .....:|.|.: .:|:.|||||
Mouse   257 LLVRLVACPSKAVFFKNVMNLIDFVAILPYFVALGTELARQRGVGQPAMSLAILRVIRLVRVFRI 321

  Fly   301 FKFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTI 365
            ||.||||:||:|||.||::...|||.|:|.|.:.:::|::.:::||.:...|:|||||.:||:.:
Mouse   322 FKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAEVDRVDTHFTSIPESFWWAV 386

  Fly   366 VTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADK 421
            |||||:|||||.|.|:.|||||.:|:::|||.|:|||||||||||..||:....::
Mouse   387 VTMTTVGYGDMAPVTVGGKIVGSLCAIAGVLTISLPVPVIVSNFSYFYHRETEGEE 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 51/136 (38%)
Ion_trans 188..415 CDD:395416 107/257 (42%)
DUF3399 445..540 CDD:403174
Kcna7NP_034726.2 BTB_2 47..137 CDD:280393 39/98 (40%)
BTB 47..130 CDD:197585 38/82 (46%)
Ion_trans 228..437 CDD:278921 97/208 (47%)
Ion_trans_2 352..431 CDD:285168 43/78 (55%)
Selectivity filter. /evidence=ECO:0000250 391..396 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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