DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and LOC100537815

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_003198877.1 Gene:LOC100537815 / 100537815 -ID:- Length:493 Species:Danio rerio


Alignment Length:514 Identity:178/514 - (34%)
Similarity:278/514 - (54%) Gaps:87/514 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVAAWLPFARAAAIGWVPIATHPLPPPPMPKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTLL 67
            :||...|...|||        ||..|........:...|:::||:||.||||...||.::|:|||
Zfish     2 TVATGDPSDEAAA--------HPGLPQDYDPGTEQECCERVVINISGLRFETQLKTLSQFPETLL 58

  Fly    68 GS-NEREFFYDEDCKEYFFDRDPDIFRHILNYYRT-GKLHYPKHECLTSYDEELAFFGIMPDVIG 130
            |. .:|..::|....||||||:...|..||.||:: |:|..|.:..|..:.||:.|:     .:|
Zfish    59 GDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVTLDVFSEEIRFY-----ELG 118

  Fly   131 DCCYEDYRDRK---RENAERLMDDKLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTG 192
            |...|.:|:.:   :|....|.|::              .::::|..||.|.:|..|.:...::.
Zfish   119 DEAIEIFREDEGFIKEEERPLPDNE--------------FQKQVWLLFEYPESSGPARIIAIISV 169

  Fly   193 FFIAVSVMANVVETVPCGHRPGRAGTLPCGERYKI------------------VFFCLDTACVMI 239
            ..|.:|:::..:||:|.......       |.:|:                  .||.|:|.|::.
Zfish   170 MVILISIVSFCLETLPIFRSDEE-------EMHKVPVNVNNSTTSYTSTYFTDPFFILETLCIIW 227

  Fly   240 FTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPYYIGLGITD-----NDDVSG----AFVTLRVF 295
            |:.|:|:|.||.|.:..|..::|::||||||:||:|.|| |:     .|...|    :...|||.
Zfish   228 FSFEFLVRFFACPSKASFFVNIMNMIDVVAIIPYFITLG-TELAEKAEDGQQGQQAMSLAILRVI 291

  Fly   296 ---RVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSI 357
               |||||||.||||:||:|||.|||:...|||.|:|.|.:.:|:|::.:::||.:...:.|.||
Zfish   292 RLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADEPESQFYSI 356

  Fly   358 PAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKR 422
            |.|||:.:|:|||:|||||||.||.|||||.:|:::|||.||||||||||||:..||:     :.
Zfish   357 PDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHR-----ET 416

  Fly   423 KAQRKARLARIRIAKASS--------GAAFVSKKKAAEARWAAQESGIELDDNYRDEDI 473
            :.:.:|:..::.:.||.|        ..:.:||....|    .||.....::::::|::
Zfish   417 EGEEQAQYLQVNVPKADSQEELKGSRSGSTISKSDYME----IQEGVNNSNEDFQEENL 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 47/142 (33%)
Ion_trans 188..415 CDD:459842 109/256 (43%)
DUF3399 471..535 CDD:463381 1/3 (33%)
LOC100537815XP_003198877.1 BTB_POZ 32..158 CDD:453885 47/144 (33%)
Ion_trans 161..415 CDD:459842 111/266 (42%)

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