DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and LOC100536252

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_073805212.1 Gene:LOC100536252 / 100536252 -ID:- Length:476 Species:Danio rerio


Alignment Length:465 Identity:163/465 - (35%)
Similarity:257/465 - (55%) Gaps:67/465 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DRRKTDD---EKLLINVSGRRFETWRNTLEKYPDTLLGS-NEREFFYDEDCKEYFFDRDPDIFRH 94
            |..:.|.   |:::||:||.||||...||.::|.||||. .:|..|:|....||||||:...|..
Zfish    24 DPERADQECCERVVINISGLRFETQLKTLAQFPATLLGDPRKRMRFFDPLRNEYFFDRNRPSFDA 88

  Fly    95 ILNYYRT-GKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDKLSENGD 158
            ||.||:: |:|..|.:..:..:.||:.|:.:..:||     |::::          |:...:..:
Zfish    89 ILYYYQSGGRLRRPVNVPVDIFMEEIKFYELGEEVI-----ENFKE----------DEGFIKEEE 138

  Fly   159 QNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVP--------CGHRPGR 215
            :.|.: :..::::|..||.|.:|..|.....|:...|.:|::...:||:|        ....||.
Zfish   139 RPLPE-SEFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFREDGKAFEEHPGV 202

  Fly   216 AGTLPCGER---YKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPYYIGL 277
            .||....::   :...||.::|.|::.|:.|.|:|..|.|.:..|.:::|:.||:|||:||:|.|
Zfish   203 NGTAASVKKPNPFTDPFFIVETLCIIWFSFELLVRFLACPSKPAFFKNIMNTIDIVAIIPYFITL 267

  Fly   278 GI-----TDNDDVSGAFVTLRVF---RVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLAMA 334
            |:     ..|...:.:...|||.   |||||||.||||:||:|||.||::...|||.|:|.|.:.
Zfish   268 GLELAEHQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIG 332

  Fly   335 IIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIA 399
            :|:|::.:::||.:...:.|:|||.|||:.:|:|||:|||||.|.||.|||||.:|:::|||.||
Zfish   333 VILFSSAVYFAETDDPDSGFSSIPDAFWWAVVSMTTVGYGDMCPVTIGGKIVGSLCAIAGVLTIA 397

  Fly   400 LPVPVIVSNFSRIYHQ----------------NQRADKRKAQRKARLAR-----------IRIAK 437
            ||||||||||:..||:                .|..:.|:...||.|::           ::...
Zfish   398 LPVPVIVSNFNYFYHRETEHEEQMQYTHVTCGQQVGEFRRGDSKASLSKSDYLDSEDGDSVKYTN 462

  Fly   438 ASSGAAFVSK 447
            .|...|:..|
Zfish   463 CSPHKAYTGK 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 41/114 (36%)
Ion_trans 188..415 CDD:459842 105/245 (43%)
DUF3399 471..535 CDD:463381
LOC100536252XP_073805212.1 None
Blue background indicates that the domain is not in the aligned region.

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