DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and kcng2

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_017950308.2 Gene:kcng2 / 100497537 XenbaseID:XB-GENE-954003 Length:489 Species:Xenopus tropicalis


Alignment Length:427 Identity:145/427 - (33%)
Similarity:227/427 - (53%) Gaps:42/427 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DRRKTDD--EKLLINVSGRRFETWRNTLEKYPDTLLG-----SNEREFF-----YDEDCKEYFFD 86
            :|.:.:|  ..::|||.|.::.....|||..|.|.||     :|..|..     ||.:|.|:|||
 Frog    52 NRGQLEDRTRHVIINVGGIKYRIPWTTLENCPLTRLGKLKTCNNYDEIMDVCDDYDINCNEFFFD 116

  Fly    87 RDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDD 151
            |:|..||.|:.:...|||...:..|..|:.|||.::||..:.:..||....:.::.|.||..|.:
 Frog   117 RNPCAFRTIMTFLAAGKLRILREMCALSFQEELIYWGIEEEQLEWCCLRKLQQKEEELAEAKMYE 181

  Fly   152 KLS----ENGDQNLQQLTNMRQKMWR---AFENPHTSTSALVFYYVTGFFIAVSVMANVVETVPC 209
            ..|    ||....||....:.|.|..   ..||||:.....:|..::..|:|::.::..:.|:|.
 Frog   182 GESGISNENSQSALQDSGRLAQCMKHLRDMVENPHSGIPGKIFACLSVSFVAITAVSLCISTMPD 246

  Fly   210 GHRPGRAGTLPCGER-YKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPY 273
            .......|  .|.:: |.|  |.|:|.||..|:.|::||...|..:|.|:|:.:::||::||:||
 Frog   247 FRDEEDRG--ECSQKCYDI--FVLETVCVAWFSLEFVLRFIQAESKCVFLRTPLNMIDIMAILPY 307

  Fly   274 YIGL----------GITDNDDVSGAFVTLRVFRVFRI---FKFSRHSQGLRILGYTLKSCASELG 325
            ||.|          |...|:.:....:.|||.|..||   .:.:|||.||:.||.|::.|..|.|
 Frog   308 YITLIVDALSGGKTGGAGNNYLEKVGLVLRVLRALRILYVMRLARHSLGLQTLGLTVRRCTREFG 372

  Fly   326 FLVFSLAMAIIIFATVMFYAEKNVNG-TNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGV 389
            .|:..|.:|:.:|:.:::.||..:.. ..|||||.::|:.:::|||:|||||||.:|.|::|...
 Frog   373 LLLLFLCVAMALFSPLVYLAENELGAKQEFTSIPGSYWWAVISMTTVGYGDMVPRSIPGQVVALS 437

  Fly   390 CSLSGVLVIALPVPVIVSNFSRIY----HQNQRADKR 422
            ..|||:|::|.||..|...|||.|    .|.|||.::
 Frog   438 SILSGILLMAFPVTSIFHTFSRSYTELKEQQQRASRQ 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 39/121 (32%)
Ion_trans 188..415 CDD:395416 86/245 (35%)
DUF3399 445..540 CDD:403174
kcng2XP_017950308.2 BTB_POZ_KCNG1_2 58..171 CDD:349728 38/112 (34%)
Ion_trans 222..465 CDD:395416 87/246 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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