DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and kcna2

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_031752644.1 Gene:kcna2 / 100496794 XenbaseID:XB-GENE-991578 Length:499 Species:Xenopus tropicalis


Alignment Length:491 Identity:169/491 - (34%)
Similarity:271/491 - (55%) Gaps:66/491 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 THPLPPPPMPKDRRKTDD---EKLLINVSGRRFETWRNTLEKYPDTLLGS-NEREFFYDEDCKEY 83
            |..||..|......:.|.   |:::||:||.||||...||.::|:||||. .:|..::|....||
 Frog    12 TSALPGHPQDSYDPEPDHECCERVVINISGLRFETQLKTLSQFPETLLGDPKKRMRYFDPLRNEY 76

  Fly    84 FFDRDPDIFRHILNYYRT-GKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRK---REN 144
            ||||:...|..||.||:: |:|..|.:..|..:.||:.|:     .:|:...|.:|:.:   :|.
 Frog    77 FFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFY-----ELGEEAMEIFREDEGFIKEE 136

  Fly   145 AERLMDDKLSENGDQNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVP- 208
            ...|.|::              .::::|..||.|.:|..|.:...::...|.:|:::..:||:| 
 Frog   137 ERPLPDNE--------------YQKQVWLLFEYPESSGPARIIAIISVMVILISIVSFCLETLPV 187

  Fly   209 ------------CGHRPGRAGTLPCGERYK------IVFFCLDTACVMIFTAEYLLRLFAAPDRC 255
                        ..:.|....|:    ||:      ..||.::|.|::.|:.|:|:|.||.|.:.
 Frog   188 FRDENEDMHGSGVNYYPYSNSTV----RYQKSNTFTDPFFIVETLCIIWFSFEFLVRFFACPSKA 248

  Fly   256 KFVRSVMSIIDVVAIMPYYIGLGI-----TDNDDVSGAFVTL------RVFRVFRIFKFSRHSQG 309
            .|..::|:|||:|||:||:|.||.     |::.......::|      |:.|||||||.||||:|
 Frog   249 GFFTNIMNIIDIVAIIPYFITLGTELAEKTEDGQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKG 313

  Fly   310 LRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYG 374
            |:|||.|||:...|||.|:|.|.:.:|:|::.:::||.:...:.|.|||.|||:.:|:|||:|||
 Frog   314 LQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYG 378

  Fly   375 DMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKAS 439
            ||||.||.|||||.:|:::|||.||||||||||||:..||:     :.:.:.:|:..::......
 Frog   379 DMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHR-----ETEGEEQAQYLQVTSCPKI 438

  Fly   440 SGAAFVSKKKAAEARWAAQESGIELDDNYRDEDIFE 475
            ..:..:.|.::|.....:....|:...|:.:||..|
 Frog   439 PSSPDLQKSRSASTLSKSDYMEIQEGVNHSNEDFRE 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 44/128 (34%)
Ion_trans 188..415 CDD:459842 107/256 (42%)
DUF3399 471..535 CDD:463381 3/5 (60%)
kcna2XP_031752644.1 BTB_POZ 33..159 CDD:453885 46/144 (32%)
Ion_trans 162..420 CDD:459842 109/266 (41%)

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