DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shal and si:dkey-43k4.5

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_017212096.1 Gene:si:dkey-43k4.5 / 100148290 ZFINID:ZDB-GENE-120215-82 Length:487 Species:Danio rerio


Alignment Length:498 Identity:151/498 - (30%)
Similarity:244/498 - (48%) Gaps:78/498 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DEKLLINVSGRRFETWRNTLEKYPDTLLG-----SNEREFF-----YDEDCKEYFFDRDPDIFRH 94
            |..|.|||.|.|.....:.|:|:|||.||     .:|.:..     :|...||::|||:|.:|.:
Zfish    15 DHLLHINVGGLRNTLCSSILKKFPDTRLGQLLSCDSEDDILQLCDDFDVQRKEFYFDRNPGLFPY 79

  Fly    95 ILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDK------- 152
            :|::|:|||||..:..|:.|:.:|:.::||....:..||...|.|||.|...:..|::       
Zfish    80 VLHFYQTGKLHIMEELCIFSFSQEIEYWGISDFFLDSCCSYRYLDRKLERHHKSWDEESDVSSVD 144

  Fly   153 --LSENGDQNL-------QQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVP 208
              :.|..|.|.       .:..|:|:.:|...|||..|..:.:|..::...:.:|:....:.::|
Zfish   145 TSVDEISDLNKDIEHFHEMRFGNIRKCLWLTLENPGYSIPSKLFSLLSICVVLISIATMCINSIP 209

  Fly   209 CGHRPGRAGTL---PCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAI 270
            ...:....|.|   |       ....|:..|:..||.|.:.|:..||:..||....:::||::::
Zfish   210 EYQKFDENGNLIEDP-------TMHVLEVFCICWFTFEVVTRMLLAPNHRKFFLLPLNVIDIISV 267

  Fly   271 MPYYIG------LGITDNDDVSGAFV-TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLV 328
            ||.||.      :|........|..| .||:.|:||:.|.:|||.|||.||.||:....|:|.|:
Zfish   268 MPIYITIFFDMLIGSESELGNLGKLVQVLRLMRIFRVLKLARHSTGLRSLGATLRHSYREVGILL 332

  Fly   329 FSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLS 393
            ..||:.:.:|:. |.|..:|.......:|||.:|:..|:|||:||||:||.|:|||:....|.|.
Zfish   333 LYLAVGVSVFSG-MAYTAENEEDVGLDTIPACWWWGTVSMTTVGYGDVVPVTVAGKLAASGCILG 396

  Fly   394 GVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGAAFVSKKKAAEARWAAQ 458
            |.||:|||:.:|.:.||..|.          ::||..|.:|   .::...||.:::....     
Zfish   397 GTLVVALPITIIFNKFSHFYR----------KQKALEASVR---NNNNKKFVMRQQRNSG----- 443

  Fly   459 ESGIE-----LDDNYRDEDI--------FELQHHHL---LRCL 485
            :|.|.     |:|...|||:        |..:.|.|   :||:
Zfish   444 DSAIHGHIHCLEDEEMDEDVDFDTGVVNFCYEDHPLTYTVRCV 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 41/113 (36%)
Ion_trans 188..415 CDD:395416 79/236 (33%)
DUF3399 445..540 CDD:403174 13/57 (23%)
si:dkey-43k4.5XP_017212096.1 BTB_2 20..117 CDD:308049 33/96 (34%)
Ion_trans 185..420 CDD:306908 80/252 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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