DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and kcnk6

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001120420.1 Gene:kcnk6 / 100145504 XenbaseID:XB-GENE-958681 Length:308 Species:Xenopus tropicalis


Alignment Length:225 Identity:50/225 - (22%)
Similarity:95/225 - (42%) Gaps:50/225 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 ALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIFTAE-YLLR 247
            |.|.|.:.|     :::.:|:|:      |..|.......:.|.||. .::.||.:.:.| :|.:
 Frog    13 AYVIYLLLG-----ALVISVIES------PYEASLRDELRQLKSVFL-NESPCVNVSSLEAFLEK 65

  Fly   248 LFAAPDRCKFVRSVM------SIIDVVAIMPY------YIGLG----ITDNDDVSGAFVTLRVFR 296
            :..|.   |:..||:      |..|:.:.|.:      .:|.|    :||:......|..| :..
 Frog    66 IINAN---KYGVSVLHNASNDSKWDIASSMFFASTLVTTVGYGYTTPLTDSGKAFCIFYAL-IGV 126

  Fly   297 VFRIFKFSRHSQGLRIL-------------GYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKN 348
            .|.:...|...|.|.::             |:..| ..::|.|  |.|.:.:::|..::..|..|
 Frog   127 PFTMLVLSSFVQRLMVMFTHKPIHYLQVQRGFDRK-MVTQLHF--FFLLILVLVFFLIIPSAIFN 188

  Fly   349 VNGTNFTSIPAAFWYTIVTMTTLGYGDMVP 378
            ...|.::.:. ||::..:::.|:|.||.||
 Frog   189 TIETTWSFLD-AFYFCFISLCTIGLGDYVP 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727
Ion_trans 188..415 CDD:459842 48/221 (22%)
DUF3399 471..535 CDD:463381
kcnk6NP_001120420.1 Ion_trans_2 76..141 CDD:462301 13/65 (20%)
Ion_trans_2 <194..251 CDD:462301 8/25 (32%)
Blue background indicates that the domain is not in the aligned region.

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