DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and kcng1

DIOPT Version :9

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001096675.1 Gene:kcng1 / 100125206 XenbaseID:XB-GENE-1011042 Length:508 Species:Xenopus tropicalis


Alignment Length:458 Identity:152/458 - (33%)
Similarity:240/458 - (52%) Gaps:44/458 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PKDRRKTDDEKLLINVSGRRFETWRNTLEKYPDTLLG-----SNEREFF-----YDEDCKEYFFD 86
            |.||:    ...:|||.|.|:.....|||::|.|.||     ||..|..     ||..|.|:|||
 Frog    57 PDDRK----HHAIINVGGFRYLLPWTTLEEFPLTRLGQLKLCSNFDEILSICDDYDVTCNEFFFD 117

  Fly    87 RDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAE-RLMD 150
            |:|..||.||.:.:.|||...:..|..|:.|||.::||..|.:..||...|..:..|.|| .|.:
 Frog   118 RNPGAFRTILTFLQVGKLRLLREMCALSFQEELLYWGIEEDNLEWCCKRRYIQKMEEFAELNLRE 182

  Fly   151 DKLSENGD----QNLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVPCGH 211
            ::|.||.:    ::..:|....:.:....|.|.:.....:|..::..|:.::.:...:.|:|...
 Frog   183 EELIENENASEPEDESKLDICMRHLGDMVEKPQSGLPGKIFACLSVLFVTITAVNLSISTMPDLR 247

  Fly   212 RPGRAGTLPCGER-YKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPYYI 275
            .....|.  |.:. |.|  |.:::.||..|:.|:|||...||.:..|:|..:::||:|||:||||
 Frog   248 EEEEKGV--CSKMCYNI--FIVESVCVGWFSLEFLLRFIQAPSKFAFIRRPLNLIDIVAILPYYI 308

  Fly   276 GLGITDN---------------DDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELG 325
            .| :.||               |.|......||..|:..:.:.:|||.||:.||.|.:.|..|.|
 Frog   309 TL-VVDNTSDGQKKPGSGNSYLDKVGLVLRILRALRILYVMRLARHSLGLQTLGLTARRCTREFG 372

  Fly   326 FLVFSLAMAIIIFATVMFYAEKNV-NGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGV 389
            .|:..|.:||.:||.:::..|..: :...||||||.:|:.::||||:|||||||.:|.|::|...
 Frog   373 LLLLFLCVAIALFAPLLYLIENEMADSQEFTSIPACYWWAVITMTTVGYGDMVPRSIPGQVVALS 437

  Fly   390 CSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARL---ARIRIAKASSGAAFVSKKKAA 451
            ..|||:|::|.||..|...|||.|.:.::..:|...|||:|   .:.:::..|.|:..:|:..::
 Frog   438 SILSGILLMAFPVTSIFHTFSRSYIELKQEQERLMCRKAQLLMKTKSQMSSISQGSDMLSESASS 502

  Fly   452 EAR 454
            .|:
 Frog   503 GAK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 45/121 (37%)
Ion_trans 188..415 CDD:395416 87/243 (36%)
DUF3399 445..540 CDD:403174 2/10 (20%)
kcng1NP_001096675.1 BTB_POZ_KCNG1_2 59..172 CDD:349728 44/116 (38%)
Ion_trans 221..461 CDD:366146 87/244 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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