DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and LOC100004160

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_021330984.1 Gene:LOC100004160 / 100004160 -ID:- Length:545 Species:Danio rerio


Alignment Length:414 Identity:157/414 - (37%)
Similarity:242/414 - (58%) Gaps:55/414 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 DDEKLLINVSGRRFETWRNTLEKYPDTLLGSNEREF-FYDEDCKEYFFDRDPDIFRHILNYYRT- 101
            ::|::|||::|.||||...||.::||||||..::.. ::|....||||||:...|..||.:|:: 
Zfish    88 NNERVLINIAGLRFETQLGTLNQFPDTLLGDPDKRIKYFDPLRNEYFFDRNRPSFDGILYFYQSG 152

  Fly   102 GKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDKLSENGDQNLQQLTN 166
            ||:..|.:..:..:.:|:.|:.:         .|:..||.||      |:...:..::.|.| ..
Zfish   153 GKIRRPVNVSIDVFADEIRFYQL---------GEEAMDRFRE------DEGFIKEEEKPLPQ-NE 201

  Fly   167 MRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVP-----------------CGHRPG 214
            .::::|..||.|.:|:.|.....|:...|.:|::...:||:|                 ...||.
Zfish   202 FQKQVWLIFEYPESSSPARGIAIVSVIVITISIITFCLETLPEFRDERELPVTSRAVNGTQERPS 266

  Fly   215 RAGTLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPYYIGLGI 279
            ...|.|        ||.::|.||:.||.|..:|.||.|.:.:|.:::|:|||:::||||:|.:|.
Zfish   267 LTFTDP--------FFIIETTCVIWFTFELFVRFFACPSKSEFSKTIMNIIDIMSIMPYFITVGT 323

  Fly   280 T---------DNDDVSGAFVTLRVF---RVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLA 332
            .         :|...:.:...|||.   |||||||.||||:||:|||.|||:...|||.|:|.|.
Zfish   324 ELAEQQGQEHNNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLF 388

  Fly   333 MAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLV 397
            :.:|:|::.:|:||.:...::|:|||.|||:.:|||||:|||||.|.|:.|||||.:|:::|||.
Zfish   389 IGVILFSSAVFFAEADEPESHFSSIPDAFWWAVVTMTTVGYGDMRPVTVGGKIVGSLCAIAGVLT 453

  Fly   398 IALPVPVIVSNFSRIYHQNQRADK 421
            ||||||||||||:..||:....|:
Zfish   454 IALPVPVIVSNFNYFYHRETDQDQ 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 37/106 (35%)
Ion_trans 188..415 CDD:459842 108/255 (42%)
DUF3399 471..535 CDD:463381
LOC100004160XP_021330984.1 BTB_POZ 90..216 CDD:453885 45/141 (32%)
Ion_trans 265..472 CDD:459842 102/214 (48%)
Blue background indicates that the domain is not in the aligned region.

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