Sequence 1: | NP_730427.1 | Gene: | Ltn1 / 40127 | FlyBaseID: | FBgn0262517 | Length: | 1747 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001019406.2 | Gene: | Ltn1 / 288308 | RGDID: | 1311238 | Length: | 1767 | Species: | Rattus norvegicus |
Alignment Length: | 1927 | Identity: | 516/1927 - (26%) |
---|---|---|---|
Similarity: | 850/1927 - (44%) | Gaps: | 341/1927 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGGKTKQAPRTKNNAKPSSSSRTAELLG---SSTPIFVGFSAQTDGGGLVPFAPGFASAEQMPDS 62
Fly 63 FDAAISPQTQIILRKLSKKDPMTKKKALQELHELIEQSDVEVLKNILPLWPKYYLNLASDPEHTV 127
Fly 128 REQTQTVLQLLMAKCKKAMAPYLKLLVPVWLGSRFDTYAPAASIASQSFRDTFAGNANRSREVCM 192
Fly 193 HCQVEILEYATRNLTFHTAATLSIGKSLTPEDAEQKYQRVIISSL----KLLSFFMGQTAQTEEL 253
Fly 254 SQVKEGFGTLVAHQKFWSFAKHKVPAIKAAWFECIYHILQSVALLDVITPQKTQLTNLCFQFIDD 318
Fly 319 ADPVVAPHIWGCVLLLQSNYVDWFVPLNIRKTLLPKLSSLLQNGFNRNAQAICPNLLPFLSKVTQ 383
Fly 384 ASLQDLDIYDFYQRFFDDMKLAVTKKFDPPLSKSDCIVIHNAYFECLRFLMQQINNNKQREQKEE 448
Fly 449 EFSFSLLDNNVLEPIAWLLKSDSTHVKIFFQHSSALVAFWDRQINNRLDNGDLY--AKLLNKFWI 511
Fly 512 RIFELVTQDLSAEEVNEQLLGHVLLLVQDLHMANPSLES-----PSVKFV----EGP--NEKIEK 565
Fly 566 SE-------------PTTPVKKAQEAAAFIQKELKQLVIKLVRICLDKANKGSGSGTSSSRYIEQ 617
Fly 618 IRTLTKMFNDAAFYKSLTDDG----------DLASALNK-------FVSLLGQLSCQACES---V 662
Fly 663 VEIVFEILPLLETG-KRFEYIENTLMKLPQHGVQNLLLHRLLSYPLCA----EAAVRQMLSGPET 722
Fly 723 CEMIARIAE-------EVVVDND---REKLNLLHKCFFQTDTGDILINAKTVDKILLSMCGPL-- 775
Fly 776 -----EQPVVDDAVEVCGSFIAQIMPVICSNNNSSL--HVRQHIFLKLFKFSLEHRPEDYLSEDT 833
Fly 834 LWEITTCWQDGLSSKDIEIDDDMLKCCAGIVEELANSAELKADTLDGMAEAMAKFVICSTENIED 898
Fly 899 EYKRLERIDETLTALLETPLKTTDKVQQFENHCVLLEALHGSVTAGVPFENACLSRNEIL----- 958
Fly 959 --PLLQ-RSTLN---FSTIYKLVYQFPPPQDTNDPEDELTEDYCDPNA----------------- 1000
Fly 1001 DVLKKWNEPLIAELLQCIR-----------VAGTAECWLEMSVLQSSTEELVLILSEKVQSFMGN 1054
Fly 1055 SSDLVAIVKERLQQAAVQQSSVIDCRLLSYLRFCPQYAAFEESASILLHEDLSENLV-------- 1111
Fly 1112 -----TQGALKTYVIALQFLLPKLSQK-----AITLSSAIMGTEPPEIWVK------------AA 1154
Fly 1155 VFHALLLNNFEGDVNEQT----DRNIIVSAVQFMTSIGERQASQKDLLHYNVEIQRQPYESVINT 1215
Fly 1216 VEFIKLLTEVLKRFPYELSIKNWDAIRIGLSSWVLSVSKSIAQYQDPKTSLFIVAVYELFAALID 1280
Fly 1281 FIRSEKQKSSTELLKNMIDEWDSLFAKEVNLVLFKSYYLLTHEVSVD-----PGFQACYEALLEQ 1340
Fly 1341 ITPVIERLDY------------SFVYSFCKSNSNITLDHLCNFLFKQLYSVQHSVRLSAVHSLRQ 1393
Fly 1394 L---TPHFVADDIELNEKQSESLDASTTICKWHFLNRFEDYLTRYDALITKYLEEFTFKLSELDD 1455
Fly 1456 LEPI--DRHNALSYLFLWDCIINACAKSPVALRAVYTNWLNDNKYEENFLHFLFRAMPVDILKNH 1518
Fly 1519 GAKVHSNGVYK-----ELTWSQQKDRHLP--LERYACHLYTEVLRKLPAVVRRWWNATQSRQKNF 1576
Fly 1577 IDNLTTNYVSSLICSEELKAIANRKEKHENMQVTVHSSTREVLAVYAIDEARMELVITLAPNYPL 1641
Fly 1642 GAVKVECGKQIGGRASS-RNVGMQLTIFLTHQNGTIYDGLTMWKNNLDKKFEGVEECYVCYTVIH 1705
Fly 1706 QETCQLPKLTCKTCKKKFHGPCLYKWFTTSSKSTCPICRNVF 1747 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ltn1 | NP_730427.1 | RING | <1724..1744 | CDD:302633 | 14/19 (74%) |
Ltn1 | NP_001019406.2 | zf-RING_2 | 1714..1763 | CDD:290367 | 24/34 (71%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166352093 | |
Domainoid | 1 | 1.000 | 497 | 1.000 | Domainoid score | I344 |
eggNOG | 1 | 0.900 | - | - | E1_COG5219 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 577 | 1.000 | Inparanoid score | I1001 |
OMA | 1 | 1.010 | - | - | QHG55728 | |
OrthoDB | 1 | 1.010 | - | - | D19753at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004053 | |
OrthoInspector | 1 | 1.000 | - | - | oto97235 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106539 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12389 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2799 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.770 |