Sequence 1: | NP_649124.1 | Gene: | CG9279 / 40124 | FlyBaseID: | FBgn0036882 | Length: | 1339 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
Alignment Length: | 1616 | Identity: | 356/1616 - (22%) |
---|---|---|---|
Similarity: | 611/1616 - (37%) | Gaps: | 419/1616 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LGQRVEVTGKNLQGKVAYVGRTNFAAGLWYGVVLDEPLGKNNGSVHGSIYFKCPTNCGLFVRAQQ 73
Fly 74 LVRIAELPKGGDNRKADEMQRD------------GARAKLSRRSG----SGKSVEEQDNQREQQA 122
Fly 123 STSGKVKATSST------------PSPQHKNRNT-------------------------HSSMET 150
Fly 151 SLAKTSGKFLATHQQPLQLPKNPV--TCESSVR-NSQSKETG----EVTLSPKKSSDIEQSKKHS 208
Fly 209 QQETNETNQPASKEVEPKNENELQSTEAANSML---DTPVNPLQTSTIGQ-LPPQKASAQLTPP- 268
Fly 269 -----PLTCNQRRSTSYTQLRPTRISQPKPTTAQAQSSTAQLTLAMPVPL-------------AL 315
Fly 316 APKR----SKTSMSPTSS-IKRVAPAAFVEPRFLEILR-----PQFTPGPALR------------ 358
Fly 359 -----------TPS--SVAPPLDNP--------ELRQLREELQLLRGQKSEDKLKLLE------- 395
Fly 396 -LERMRIHNEQLMEFKSQIMAQQVLLQ-------------RELQRSRHE-LREAQDVSSKLKREL 445
Fly 446 DEIAESIELLTLDKEMAEERMETLQMELEMAQERNDELSLDVEI-LKAEQEEQQGQRIEKSEKQI 509
Fly 510 GSGVTNQSA-GEFLRLEQYNQRLRETVV-RLRDTLAEEKQIGQRTHKELETKHSEINELKSIKE- 571
Fly 572 --LLSRRVDNMEMQLMDLKEQVDASLGAEAMVTQLASLKLELED-RVKLLEDEVNELEALEQIQE 633
Fly 634 Q-------LIESNQELETDLREEID-KLSGHVKILEQQKNAAMESLYDRDVTIMKFRDL-VRQLQ 689
Fly 690 -----------------EQLQLRA-----DGTLSI---EDFSSANESQQEDGSNQSQTDYQHIFS 729
Fly 730 VSK---AYGRALEQQIKTVELRLQRQH-LEHVLAFVPE----QFLLRGGEHDVVLVMLLLERMNE 786
Fly 787 KLTIVCQAINEKFPTACEFGRD------AIFEGYSVQRYIFRSQCLYLLKSLQLVLQQFRHGLTH 845
Fly 846 CDYELCTHAAIYRSDL---------------DAQEQQ--------------------LDEFVRLL 875
Fly 876 KTGQLD----EHTNCEPIQRVLHYVSG--LHQNLMPPQTLVELLDEQQLYEALIEVYEAGLDAVN 934
Fly 935 ANAGLMHTIIQLGHEQTAS-FSCMQM--------LMEQSCAHKQKLKKLQRKLSGSKTASWTGMQ 990
Fly 991 CARYQRIMEANEALGTLIRLLGCTAREASKDSNGGIAHEKLWRMLVLNYNKFAPSQEAEEPREVD 1055
Fly 1056 AYSQRCMQLLEEQFDELFALLDS-----TDVNTEYVRHPTC---------------NTLQERAA- 1099
Fly 1100 ------QVKRHYEDVKNLELTVAEREK--EIKSLKYTAKMKQQ-----DYSELQVRKEMAEKQLS 1151
Fly 1152 KQCHVLAGFAEAVEQLEQ-------SILAKEAALGQALNMLADKLTSLE-QSQEHWK-----EQQ 1203
Fly 1204 QADSACLTSTTISSNREMNMLHQA-------LRQ-----ERSLRVELQGSEMRKTF--------- 1247
Fly 1248 --AALEPLHVPQAGSQELTDLEKDLRSLKNQWLLAHLEMGAAGRQRRSEIELQGSR 1301 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9279 | NP_649124.1 | NIP100 | 7..642 | CDD:227569 | 179/794 (23%) |
CAP_GLY | 10..74 | CDD:279625 | 33/63 (52%) | ||
Smc | 422..>1276 | CDD:224117 | 225/1029 (22%) | ||
PCRF | 422..>490 | CDD:305100 | 18/69 (26%) | ||
Dynactin | 702..965 | CDD:289240 | 64/329 (19%) | ||
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | |
CAP_GLY | 125..189 | CDD:396049 | 34/67 (51%) | ||
CAP_GLY | 239..306 | CDD:396049 | 8/66 (12%) | ||
SMC_prok_B | <546..912 | CDD:274008 | 89/390 (23%) | ||
Smc | 734..1591 | CDD:224117 | 199/921 (22%) | ||
SHE3 | 1502..1702 | CDD:293683 | 38/150 (25%) | ||
CLIP1_ZNF | 1773..1789 | CDD:406934 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447781 | |
Domainoid | 1 | 1.000 | 58 | 1.000 | Domainoid score | I2622 |
eggNOG | 1 | 0.900 | - | - | E1_COG5244 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.830 |