DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr76Bd and LOC4576972

DIOPT Version :10

Sequence 1:NP_001262052.1 Gene:Cpr76Bd / 40123 FlyBaseID:FBgn0036881 Length:1231 Species:Drosophila melanogaster
Sequence 2:XP_001230824.3 Gene:LOC4576972 / 4576972 VectorBaseID:AGAMI1_012517 Length:186 Species:Anopheles gambiae


Alignment Length:188 Identity:63/188 - (33%)
Similarity:83/188 - (44%) Gaps:59/188 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1025 LASSTAYGIQAGNLGHGSGPSGGYYGAISLGHAKVSPALSYHGLLSHGSGLASGASSLAHLDSSL 1089
            :|.::|..|....||....|.|.|:..:...||   |..:||                       
Mosquito    12 VAVASAVAIHPSPLGAYHAPLGAYHAPLGAYHA---PLGAYH----------------------- 50

  Fly  1090 SGYSHGVGGIGPLGAGFYRYAPSVPALSSHAPVAATAYLKSAPVTQHAVLKVVPEKHLEHFDAHP 1154
                      .||||     .|:|..:::...||..|    ||..:              :||:|
Mosquito    51 ----------APLGA-----YPAVAKVAAPLAVAKVA----APYAE--------------YDANP 82

  Fly  1155 RYAFEYAVNDPHTGDNKHQKEERDGDVVKGEYSLVEPDGNVRTVKYYADWETGFHAEV 1212
            :|::.|||.|..|||||:|:|.|.||||.|.||||||||..|||:|.||...||:|.|
Mosquito    83 QYSYSYAVADAVTGDNKNQQESRSGDVVTGSYSLVEPDGTRRTVEYNADPINGFNAVV 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr76BdNP_001262052.1 2A1904 130..>270 CDD:273344
PRK07003 <456..>610 CDD:235906
Chitin_bind_4 1156..1208 CDD:459790 32/51 (63%)
LOC4576972XP_001230824.3 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.