Sequence 1: | NP_649116.1 | Gene: | brv1 / 40116 | FlyBaseID: | FBgn0036874 | Length: | 728 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038954049.1 | Gene: | Pkd1l2 / 691069 | RGDID: | 1588631 | Length: | 2492 | Species: | Rattus norvegicus |
Alignment Length: | 605 | Identity: | 131/605 - (21%) |
---|---|---|---|
Similarity: | 217/605 - (35%) | Gaps: | 137/605 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 102 ELMITERHRNERVNLKYRLITEELWLTGKLFLVYFFMALAFFDELLY-FNTEATELLFQCNHGDA 165
Fly 166 FGLLSVGDVPDIYFFVVSSLVLAFTDGKNTSGGAPWIHAEG-TRLLGVVRLRQLRTESN------ 223
Fly 224 ---------RLGLSLPVFTERDFSESWTL-PYERVPYTDKYWPI--------YTPWLPSVSVARD 270
Fly 271 NLLMGINHVGHMFNYPESKGYKVLLSDTRHKSLKIIDYLMKKNWLDANTTALFMDFSLYNADANT 335
Fly 336 FTVCTLWVEKFPYQYPDGHTRIESHTFVEQLREFTKFGMLMVFVFVVTWLQFTKAFFLKVWYDPR 400
Fly 401 QLKTLWVQVDAMIVALSLVVGMIMSVRDNLVQ---------KMIKSVEIAVVVD----------- 445
Fly 446 -FLDFREPAQLAYLEDVVTGLAVALVTMRLWKVLQFSATFQLFTKTIAMAWDALLCTFVITVIFI 509
Fly 510 IAIGIATVTING----NYTSNFRDFPKGIVTVTCFAFGYTNLV-YPPDIFYGGEWLGILL----Y 565
Fly 566 TIMGFVVKYMLINLIVSMMRDQMASVKADRDKKVRQRITFWQFLRVEYAHFINYIVKVFHCQKGY 630
Fly 631 QRKNRTVAQNIQRKLNSNEL 650 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
brv1 | NP_649116.1 | PKD_channel | 165..591 | CDD:285288 | 106/480 (22%) |
Pkd1l2 | XP_038954049.1 | CLECT | 70..186 | CDD:153057 | |
Gal_Lectin | 201..283 | CDD:396628 | |||
REJ | <697..894 | CDD:366875 | |||
GPS | 1308..1347 | CDD:396408 | |||
PLAT_polycystin | 1418..1537 | CDD:238850 | |||
PKD_channel | 2013..2433 | CDD:400395 | 106/473 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1276906at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10877 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |